Mycolicibacterium smegmatis MC2 155: MSMEI_1545
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Entry
MSMEI_1545 CDS
T02191
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msg
Mycolicibacterium smegmatis MC2 155
Pathway
msg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSMEI_1545 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msg03019
]
MSMEI_1545 (groL1)
03110 Chaperones and folding catalysts [BR:
msg03110
]
MSMEI_1545 (groL1)
03029 Mitochondrial biogenesis [BR:
msg03029
]
MSMEI_1545 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msg04147
]
MSMEI_1545 (groL1)
Enzymes [BR:
msg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSMEI_1545 (groL1)
Messenger RNA biogenesis [BR:
msg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSMEI_1545 (groL1)
Chaperones and folding catalysts [BR:
msg03110
]
Heat shock proteins
HSP60 / Chaperonin
MSMEI_1545 (groL1)
Mitochondrial biogenesis [BR:
msg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSMEI_1545 (groL1)
Exosome [BR:
msg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSMEI_1545 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
MSMEI_1545 (groL1)
Exosomal proteins of breast cancer cells
MSMEI_1545 (groL1)
Exosomal proteins of colorectal cancer cells
MSMEI_1545 (groL1)
Exosomal proteins of bladder cancer cells
MSMEI_1545 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFP38018
UniProt:
A0QSS4
LinkDB
All DBs
Position
1673178..1674800
Genome browser
AA seq
540 aa
AA seq
DB search
MSKQIEFNETARRAMEAGVDKLADAVKVTLGPRGRHVVLAKSFGGPQVTNDGVTIAREID
LEDPYENLGAQLVKSVATKTNDVAGDGTTTATVLAQALVRAGLRNVAAGANPIALGSGIS
KAADAVSEALLASATPVDDKKAIAQVATVSSRDEQVGELVGEAMTKVGHDGVVTVEESST
LETYLEVTEGVGFDKGFLSAYFVTDFDSQEAVLEDALVLLHRDKISSLPDLLPLLEKVAE
AGKPLLIVAEDVEGEALSTLVVNAIRKTLKAVAVKAPFFGDRRKAFLDDLAIVTGGQVVN
PDVGLLLREVGLEVLGSARRVVVNKDSTVIVDGGGTAEAIADRVKQIKSEIETTDSDWDR
EKLQERLAKLAGGVAVIKVGAATETDLKKRKEAVEDAVAAAKAAVEEGIVTGGGAALVQA
RSAVEKLRGELSGDEALGVDVFASALSAPLYWIATNAGLDGSVVVNKVSELPKGQGFNAA
TLEFGDLVSAGVVDPAKVTRSAVLNAASVARMILTTETAVVDKPADEDEHGHGHHHGHAH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagattgaattcaacgaaaccgcccgccgggcgatggaggccggcgtcgac
aagctcgccgacgccgtcaaggtcacgctcggcccgcgcggtcgtcacgtggtgctggcc
aagtctttcggcggcccgcaggtcaccaacgacggtgtgacgatcgcccgcgagatcgac
ctcgaggatccgtacgagaacctcggcgcccagctggtgaagtccgtcgccaccaagacc
aacgacgtcgccggtgacggcaccaccaccgccaccgtgctggcccaggccctggtcagg
gccggtctgcgcaacgtcgccgccggtgccaacccgatcgcgctgggttcgggcatcagc
aaggccgccgacgcggtcagcgaggcgctcctcgcctcggcaacgccggtcgacgacaag
aaggccatcgcgcaggtcgccaccgtctcgtcgcgcgacgagcaggtcggcgagctcgtc
ggtgaggccatgaccaaggtgggccacgacggcgtcgtcaccgtcgaggagtcctcgacg
ttggagacctacctcgaggtcaccgagggcgtcgggttcgacaagggcttcctgtcggcc
tacttcgtcaccgacttcgactcgcaggaagcagttctcgaagacgcgctggtgctgctg
caccgcgacaagatcagctcgctgccggatctgctgccgctgctggagaaggtcgccgag
gcaggcaagccgctgctgatcgtcgccgaggacgtcgagggcgaagccctgtcgaccctc
gtcgtcaacgcgatccgcaagacgctcaaggccgttgcggtcaaggcgccgttcttcggt
gatcgccgcaaggcgttcctggacgatctcgcgattgtcaccggcggccaggtcgtcaac
cccgacgtcggcctcctgctgcgtgaggtcggcctggaggtcctcggctcggcacgtcgt
gtcgtggtcaacaaggacagcaccgtgatcgtcgacggcggcggcaccgccgaggccatc
gccgatcgcgtcaagcagatcaagtccgagatcgagaccaccgactccgactgggatcgc
gagaagctgcaggagcggctggccaagctggccggcggcgtcgcggtgatcaaggtcggc
gcggccaccgagaccgacctgaagaagcgcaaggaagcggtcgaggacgcggttgccgcg
gccaaggcagcggtcgaggagggcatcgtgaccggcggcggcgccgcactggtgcaggcc
cgctcggcggtggagaagctccgcggcgagctcagcggtgacgaggcgctcggcgtcgac
gtcttcgcctcggcgctgtcggctccgctctactggatcgccaccaacgccggcctcgac
ggttccgtcgtggtgaacaaggtctccgaacttcccaaggggcagggcttcaacgccgcc
acgctggagttcggtgatctggtctccgccggcgtcgtcgatccggccaaggtgacccgc
tcggctgttctcaacgccgcctcggtggcccggatgatcctgacgacggagaccgccgtc
gtcgacaagccggccgacgaggacgagcacggccacggccaccaccacggccacgctcac
tga
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