Mycolicibacterium smegmatis MC2 155: MSMEI_1900
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Entry
MSMEI_1900 CDS
T02191
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msg
Mycolicibacterium smegmatis MC2 155
Pathway
msg03420
Nucleotide excision repair
msg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSMEI_1900
03430 Mismatch repair
MSMEI_1900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msg03400
]
MSMEI_1900
Enzymes [BR:
msg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSMEI_1900
DNA repair and recombination proteins [BR:
msg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSMEI_1900
MMR (mismatch excision repair)
Other MMR factors
MSMEI_1900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFP38372
UniProt:
I7FZ56
Structure
PDB
PDBj
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All DBs
Position
2022034..2025321
Genome browser
AA seq
1095 aa
AA seq
DB search
MTQVASPVVQARYSPVELSAALGLFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARV
VWLVANGFATPSQVLGLTFTRKAAGQLLRRVRTRLARLAGAGLAPGSGASDESATVSTYH
AFAGTLLREHGLLLPVEPDTRLLSETELWQLAYDVVCAHPGHLDTEKTPAAVTAMVLRLS
GALAEHLVDTDQLRDTHVELERLVHTLPAGPYQRDRGPSQWLLRMLATQTERTELVPLID
ALHQRMRAEKVMDFGMQMAAAARLAARFPQVGEQLRQRFRVVLLDEYQDTGHAQRIALSS
LFGGGADDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPYSDGTPAPTLELRTSWRNP
PSTLHVANAVSEEARRRSVAVRALRPRPDAEPGTIRCALLNNVAAERDWVADHLARAYHG
AIGRGEAAPTAAVLVRRNADAAPMAEALTARGVPVEVVGVAGLLAVPEVADLVAMLRLIA
DPTAGSAVMRILTGPRWRFGARDIAALWRRAVELDDRPKGELGTADIVAQAAPDADTACV
ADAICDPGDAERYSPAGYERIVALGRELTMLRAHLGHPLPELVAEVRRVLGLDAEARAAR
PVAAGWAGTENLDRFSDLVSDFAGHAGASVSALLAYLDAAVEVENGLAPAELTVSHDRVQ
ILTVHAAKGLEWQVVAVPHLSARVFPSTTQARTWLTDASDLPPLLRGDRATESEIGVPVL
DTSDIYDRKILSDKISDHKKSLDQRRVDEERRLLYVAITRAEDTLLLSGHHWGATESKPR
GPSEFLCELKTILEEATAAGTPCGEIEHWAPDPAPGETNPLRDQVVEALWPPVASADDHV
HRGAQLVAAAMAGEVSAEADQEGWAADVDALLAERERPPQQEDTELPGQLSVSTLVELSR
DPKAALTRLRRRLPQRPDPHALLGTTFHEWVQRYFHAERLFDLDDLPGAVDSDSGRAVEE
SLAELQDAFVKSPWAARTPVEVEVPFDMVLGETVVRGRIDAVFAEPDGTTMVLDWKTGDP
PETPEAKEHAAVQLAVYRLAWAAMRGCPPESVRAAFHYVRSGQTVIPETLPGAEELVKLL
AAAPTETAEEADRIT
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcaggtagcatcgcccgtcgtgcaggcgcgatacagcccggtcgagctctcggcg
gccctcgggcttttcccgcccaccgatgaacaggccgcggtgatcgccgcgccgccaggg
ccgctggtcgtgatcgccggtgccggtgcgggcaagaccgagaccatggctgcgcgcgtg
gtgtggttggtggccaacgggttcgccacgccgtcgcaggtgctgggtctgacattcacg
cgcaaggccgccggtcagctgctgcgccgggtccgcacgcggctcgcgcgtctggccggt
gccggactggcaccgggctcgggtgcgtccgacgaatcggcgaccgtcagcacctaccac
gcgttcgcgggaaccctgctgcgtgagcacggcctattgctgcccgtcgaacccgacacc
cggctgctcagcgagaccgagctgtggcagctggcctacgacgtggtgtgtgcccacccc
ggacacctcgacaccgagaagaccccggccgccgtcaccgcgatggtgttgcggctctcg
ggcgcactcgccgagcatctcgtggacaccgaccagttgcgggacacacacgtcgaactg
gagcgactggtccacaccctgcccgccgggccgtatcagcgtgaccgcgggcccagccag
tggctgctgcgcatgctcgccacccaaaccgagcgcaccgaactggtgccgctcatcgac
gcgctgcaccagcgcatgcgcgccgagaaggtcatggacttcggcatgcagatggccgcg
gccgcacgcttggcggcgcggttcccgcaggtgggcgagcaactgcggcagcgctttcgc
gtggtgctgctcgacgagtaccaggacaccggccacgcgcagcgcatcgcgttgtcgtcg
ttgttcggcggcggtgccgacgacggtctcgcgctcaccgcggtgggcgatccgatccag
tcgatctacggctggcgcggggcctcggcgaccaacctgccgcggttcaccaccgatttc
ccgtactccgacggcacccccgcgccgacgctggagctgcggaccagttggcgcaacccg
cccagcacgctgcacgtggccaacgcggtctccgaggaagcgcgccgccgctcggtggcc
gtccgcgcactgcggccccggcccgacgccgaacctggcacgatccgctgcgcgttgctg
aacaacgtcgccgccgaacgcgactgggtcgcagaccatctcgcccgtgcctaccacggc
gccatcggacgcggcgaggccgcgcccaccgcggcggtgctcgtgcggcgcaacgccgac
gccgcgccgatggcagaggcgctcaccgcccgcggcgttcccgtggaggtcgtcggtgtc
gccgggctgctcgccgtgcccgaggtcgccgacctggtcgcgatgctgcggctgatcgcc
gacccgaccgccggttcggcggtcatgcggatcctcaccggtccgcgctggcggttcggt
gcccgtgacatcgccgcgctgtggcggcgtgccgtcgaactcgacgaccggccgaaaggc
gaactgggcacggcggacatcgtcgcgcaggcagcacccgacgccgacaccgcgtgcgtg
gccgacgcgatctgcgacccgggagatgccgaacggtattcgcctgccgggtacgagcgc
atcgtcgcgctgggacgtgaactcaccatgcttcgcgcgcacctgggccatccgctgccg
gaactggtcgccgaggtgcgccgcgtgctgggcctggacgccgaggcccgcgccgcacgc
cccgtcgcggccgggtgggcaggcaccgagaacctcgaccggttcagcgatctggtgtcc
gatttcgccgggcacgcaggcgcatcggtatcggcgttgctcgcctacctcgatgccgcg
gtggaggtcgagaacggtctggccccagcggaactcacggtgtcgcacgaccgcgtgcag
atcctcaccgtccacgcggccaagggactggaatggcaggtggtggcggtgccgcacctg
agtgcccgggtgttcccgtcgaccacccaggcgcggacatggctgaccgatgcctccgac
ctgccgccgctgctgcgcggtgaccgtgccaccgagtccgagatcggcgtcccggtgctg
gacacgtctgacatctacgaccggaaaatcctgtccgacaagatttctgaccacaagaag
agcctggatcagcggcgggtggatgaagagcgtcggctgctgtacgtcgcgatcacccgt
gcggaggacacgctgctgctgtccgggcatcactggggcgccaccgagagcaaaccgcgc
gggccctcggagttcctgtgcgagctgaagaccatcctggaagaggccacggcagcgggt
acgccgtgcggtgagatcgagcactgggcaccggatcccgcaccgggcgagaccaatcca
ctgcgcgatcaggtggtcgaggcgctgtggccgccggtggcctccgccgatgaccatgtg
caccgcggtgcgcaactggtcgccgccgcgatggccggtgaggtgagcgccgaggccgat
caggagggctgggccgccgacgtcgacgcactgctggccgaacgcgagcgcccaccgcaa
caggaggacaccgaactgccgggtcagctgtcggtgagcaccctggtcgaactcagccgt
gacccgaaggccgcgctgacgcggctgcggcgccgcctaccgcaacggcctgatccacat
gccctgctgggcaccacattccacgagtgggtgcagcgctacttccatgccgagcgcctc
ttcgacctcgacgaccttcccggtgcggtcgacagtgacagcggacgcgccgtcgaggag
agcctggccgaactgcaggacgcgttcgtcaaatccccgtgggccgcgcgcaccccggtg
gaggtcgaggtgccgttcgacatggtgctcggcgagaccgtcgtgcggggccgcatcgac
gcggtgttcgccgaaccggacggcaccaccatggttctcgactggaagaccggcgacccg
ccggaaactccggaggccaaggaacatgcggcggttcagctcgcggtgtaccggctggcg
tgggcggcaatgcgcggctgcccgcccgagtcggtgcgcgcggcgttccactatgtccgt
tccggtcagaccgtcatccccgaaaccctgcccggagcagaagaactggtgaaactgctc
gccgcagcgccgaccgaaacagccgaggaagccgaccggatcacgtga
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