Mycolicibacterium smegmatis MC2 155: MSMEI_2329
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Entry
MSMEI_2329 CDS
T02191
Symbol
hup
Name
(GenBank) DNA-binding protein hupB
KO
K03530
DNA-binding protein HU-beta
Organism
msg
Mycolicibacterium smegmatis MC2 155
Brite
KEGG Orthology (KO) [BR:
msg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msg03032
]
MSMEI_2329 (hup)
03036 Chromosome and associated proteins [BR:
msg03036
]
MSMEI_2329 (hup)
03400 DNA repair and recombination proteins [BR:
msg03400
]
MSMEI_2329 (hup)
DNA replication proteins [BR:
msg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MSMEI_2329 (hup)
Chromosome and associated proteins [BR:
msg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MSMEI_2329 (hup)
DNA repair and recombination proteins [BR:
msg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MSMEI_2329 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AFP38797
UniProt:
Q9ZHC5
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All DBs
Position
2473082..2473708
Genome browser
AA seq
208 aa
AA seq
DB search
MNKAELIDVLTTKMGTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVISGAQKLPADGPAVKRGVTAGPAKKAAKKAPA
KKAAAKKTATKAAAKKAPAKKAATKAPAKKAATKAPAKKAATKAPAKKAATKAPAKKAAA
KAPAKKAATKAPAKKAAAKKAPAKKGRR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcggagctcatcgacgtactcacaaccaaaatgggcaccgatcgtcggcag
gctaccgccgcggtggagaacgtcgtcgacaccatcgtgcgcgcggtgcacaagggcgat
agcgtgacgatcaccgggttcggtgtcttcgagcagcgccgccgcgccgctcgcgtggcc
cgtaacccgcggaccggtgagaccgtgaaggtcaagccgacctcggtgccggcgttccgt
cccggtgcgcagttcaaggcggttatctctggcgcacagaagctcccggccgatggtccg
gccgtgaagcgtggcgtcaccgctggtcccgccaagaaggccgccaagaaggcaccggcc
aagaaggccgccgccaagaagacggcgaccaaggctgcggcgaagaaggccccggccaag
aaggccgcgaccaaggctccggcgaagaaggccgcgaccaaggctccggcgaagaaggcc
gcgaccaaggctccggccaagaaggccgcgaccaaggctccggccaagaaggccgccgcc
aaggctccggccaagaaggccgcgaccaaggctccggccaagaaggccgccgccaagaag
gccccggccaagaagggccgcaggtaa
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