Mycolicibacterium smegmatis MC2 155: MSMEI_3795
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Entry
MSMEI_3795 CDS
T02191
Symbol
helY
Name
(GenBank) ATP-dependent DNA helicase HelY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
msg
Mycolicibacterium smegmatis MC2 155
Brite
KEGG Orthology (KO) [BR:
msg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msg03019
]
MSMEI_3795 (helY)
Enzymes [BR:
msg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MSMEI_3795 (helY)
Messenger RNA biogenesis [BR:
msg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MSMEI_3795 (helY)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
AAA_30
nSTAND3
WHD_DUF6293
Motif
Other DBs
NCBI-ProteinID:
AFP40253
UniProt:
I7FNH3
LinkDB
All DBs
Position
complement(3958050..3960794)
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AA seq
914 aa
AA seq
DB search
MTMPPEGRPDQLTAFTAQLPFTLDDFQVRACQALENGHGVLVCAPTGAGKTIVGEFAVHL
ALASGGKCFYTTPIKALSNQKHNDLVARYGAEKIGLLTGDQSINGDADVVVMTTEVLRNM
LYANSQALHGLSYVVMDEVHFLADRMRGAVWEEVILHLPDEVLLVSLSATVSNAEEFGGW
IQTVRGDTTVVVDEHRPVPLSQHMMVGKRLFDLFERSSSTLVDPELLRHISHRREADRLM
DWQPRGRGRGGRPQFYRPPGRPEVITALDDAGLLPAITFVFSRAGCDAAVKQCLRSSLRL
TTREERARIAEIVDRRCSDLNESDLIVLDYHEWREGLLRGLAAHHAGMLPTFRHTVEELF
TAGLVKAVFATETLALGINMPARTVVLERLVKFNGEQHLPLTPGEYTQLTGRAGRRGIDV
EGHAVVLWRPDDSTAEPAEVAGLASTRTFPLRSSFAPSYNMTINLVQHMGPQQAHELLER
SFAQYQADRSVVGLVRGIRRGERMLGELAAEIGGKDSAVIDYARLRAKIGERERAQSRAS
RLQRRRAATDALADLRKGDIITITHGRRGGLAVVLEAAQDRDDPRPLVLTEHKWAGRISS
ADYSGASAPLGSMSLPKRVEHRQPRVRKDLASALRSAAAGLVPSRRSNRGAPERDVDPEL
AGLRERLRSHPVHKLPDREEQVRIAERYLRIERDNLQIQQKVNAATNSLARTFDRIVALL
SERGYIEAGDGGDAGQPRVTDAGRLLARIYSESDLLVAECLRAGAWDGLEPAELAGVLSA
VLYESRGDAQGVPAGTDVPTAGLRQALVRTRRLSAALRSDEQRHRIAPGREPDEGFVTAV
YRWATTGDLASALAASDITGTGSPLSAGDFVRWCRQVLDLLDQVRNAAPTPSLRNTAKRA
INDVRRGVVAVDAG
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccacctgagggccgccctgatcagctgaccgcgttcaccgcgcagctgccg
ttcaccctcgacgacttccaggtgcgtgcctgccaggcgttggagaacggccacggcgtg
ctggtctgcgcgccgaccggcgcaggcaagaccatcgtcggcgagttcgctgtgcacctc
gcgctcgcatcgggtggcaaatgcttctacaccaccccgatcaaggcgctgagcaaccag
aaacacaacgatctggtggcccggtacggcgccgagaaaatcgggctgctcacgggcgac
cagtccatcaacggcgatgccgacgtggtggtgatgaccaccgaggtgctgcgcaacatg
ctgtacgcgaactcgcaggcactgcacgggctttcctacgtggtgatggacgaggtgcac
ttcctggccgaccgcatgcgcggggcggtgtgggaagaggtcatcctgcacctgcccgac
gaggtgctgctggtgagcctgtcggccacggtgagcaatgccgaggagttcggcggctgg
atccagacggtgcgcggcgacaccacggtggtggtggacgaacaccggccggtgccgctg
tcgcagcacatgatggtcggcaagcgcctgttcgacctgttcgaacgttcgtcgtcgacg
ctcgtcgacccagagttgttgcggcacatcagtcatcgccgcgaggccgaccggctgatg
gactggcagccacgcggtcgcgggcgcggcggcaggccccagttctaccggccgccgggc
cgccccgaggtgatcaccgcgctcgacgacgcgggtctgctgcctgccatcacgttcgtg
ttctcgcgcgccggatgcgacgccgcggtcaagcagtgccttcggtcgtcgttgcggctg
accaccagagaggagcgcgcccgcatcgccgagatcgtggaccgccgctgctccgatctc
aacgagtccgacctgatcgtgctcgactaccacgagtggcgtgagggactgctgcgcggc
ctggccgcccaccacgccggaatgctgccgacgttccgccacaccgtcgaagaactgttc
accgccgggctggtcaaggcggtcttcgccaccgagacactggcgctcgggatcaacatg
cccgcgcggaccgtcgtgctggagcgcctggtgaagttcaacggcgagcagcatctgccg
ttgacgccgggggagtacacgcagttgaccgggcgggccgggcgccgcggtatcgacgtg
gagggccacgccgtcgtgctgtggcgtcccgacgacagcacggccgaacccgccgaggtc
gcggggttggcgtccacgcgcacgttcccactgcgcagttcgttcgcgccgtcgtacaac
atgacgatcaacctggtgcagcacatgggaccgcagcaggcgcacgaactcctggagcgc
tcgttcgcgcagtaccaggccgaccgttcggtggtcggtctggtgcgcggtatccgccgc
ggcgagcgcatgctcggcgaactggccgccgagatcggcggaaaggactcggcggtcatc
gattacgcacgtctgcgcgccaagatcggcgagcgcgaacgcgcgcagtcgcgggcgtcg
cggctgcagcggcgcagggcggccaccgacgcgctcgcggatctgcgcaagggcgacatc
atcaccatcacgcacgggcgccgcggtgggctcgctgtcgtcctggaggccgcgcaggac
cgcgacgaccccaggccgctggtgctcaccgaacacaaatgggcgggccggatctcgtcg
gccgactattcgggcgcatcggcgccgctgggctcgatgtcactgccgaaacgcgtcgag
caccgccagcccagggtgcgcaaggacctcgcgtcggcgttgcgatcggcggccgcgggc
ctggtgccgtcgcgccggtcgaaccgcggtgcacccgaacgcgacgtcgatccggaactg
gccggtctgcgtgagcgtctgcgcagccatccggtccacaaactgcccgaccgcgaggag
caggtgcgtatcgccgaacgatatctgcggatcgaacgcgacaacctgcagatccagcag
aaggtcaacgcggcgaccaactcgctggcccgcacgttcgaccgcatcgtggcgctgctc
agcgaacgcggctacatcgaggcaggcgacgggggcgatgcgggccaaccacgggtgacc
gacgcgggccggttgctggcccgcatctacagcgaaagcgacctgctggtggccgaatgc
ctgcgggccggtgcgtgggacgggctggaacccgccgaactcgcgggcgtgctctcggcc
gtgctgtacgagtcccgcggcgacgcgcagggtgtcccggcaggcacggacgtgcccacc
gcggggttgcggcaggcgctggtacgcacccggcggttgtcggccgcgctgcgcagcgac
gaacaacggcaccgcatcgcgcccggccgcgaacccgacgaggggttcgtgacggcggtg
taccgctgggccaccacaggcgatctcgcgtcggccctcgccgcgtcagacatcaccggg
accggttctccgttgtcggcaggggatttcgtgcggtggtgccgccaggtgctcgatctg
ctcgaccaggtgcgcaacgcggcacccaccccgtcgctgcgcaataccgcgaaacgcgcg
atcaacgacgtccggcgcggcgtcgtcgctgttgatgcggggtag
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