Entry |
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Name |
(GenBank) ATP/GTP-binding site motif A
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KO |
K06915 | DNA double-strand break repair helicase HerA and related ATPase |
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Organism |
msg Mycolicibacterium smegmatis MC2 155
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Brite |
KEGG Orthology (KO) [BR:msg00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:msg03400]
MSMEI_4606
DNA repair and recombination proteins [BR:msg03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSMEI_4606
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
complement(4817064..4818893)
|
AA seq |
609 aa
MDHHVQAVAENVEVRIGHQDRDLDQPVGLEVQPGHLAVDPHQFVSHEDPQYSHTRPPRAH
TRRKTSSVKTHVSSFRGSLGRTEDRGMTTESTATPAQQIAAGYAVEGQALELGTVVVDGA
VDPTAQVRIPLATVNRHGLIAGATGTGKTKSLQVLAEQLSAAGVPVLMADVKGDLSGLAK
PGESNDKVTQRAADTGDDWTPTGFPVEFLSLGTEGIGVPVRATITSFGPILLSKVLGLNQ
TQESTLGLIFHWADQKGLPLLDIKDLRSVIQYLTSDEGKPELKALGAVSTTTAGVILRAL
VNLEAEGADTFFGEPELEPKDLLRVDDQGRGVITLLELGAQAARPVMFSTFLMWVLADLF
TTLPEVGDVDKPKLVFFFDEAHLLFNDASKAFLEQVEQTVKLIRSKGVGVFFCTQLPTDV
PNDVLSQLGARIQHALRAFTPDDQKALTKTVRTYPKTKVYDLEEALTSLGIGEAVVTVLS
EKGAPTPVAWTRMRAPRSLMDTIGADAISAAAKASPLQATYGQTVDRDSAYERLAAKLAP
PEGGDAGGFAGVEATGEAAPMPAPAQPEEPGFFEKMVASPAFKSAMRSAGTVIGREITRS
IFGTGRRRR |
NT seq |
1830 nt +upstreamnt +downstreamnt
gtggatcaccacgtccaggccgtcgccgagaatgttgaggtccgcatcggtcaccaggac
cgcgatctcgatcagccggtcggacttgaggtccagcccggtcatctcgcagtcgatcca
caccagttcgtctcgcacgaagatccacagtattcgcacacgcgcccgccacgcgcccat
acccgtaggaagaccagtagtgtcaaaacccacgtgagctcgttccggggctcgctcggg
cgaacggaggaccgcggtatgaccaccgaatcgacagctactcccgcgcagcagatcgcc
gccggatatgccgtcgaagggcaggctctcgaactgggcaccgtcgtcgtcgacggtgcc
gtcgaccccaccgcccaggtgcgcatcccgctcgccacggtcaaccggcacggtctgatc
gccggggccaccggcaccggcaagacgaagtccctgcaggtgctcgccgagcagctctcc
gccgcgggcgtgccggtgctgatggccgacgtcaagggcgacctgtccgggctggccaaa
ccgggggagtcgaacgacaaggtcacccagcgcgccgccgacaccggggacgactggaca
cccacgggcttcccggtcgagttcctgtcgctgggcaccgagggcatcggcgtgccggtg
cgcgcgacgatcaccagcttcggcccgatcctgctgtcgaaagtgctggggctcaaccag
acccaggagtccaccctggggctgatcttccactgggccgaccagaagggtctgccgctg
ctggacatcaaggatctgcgctcggtcatccagtacctgaccagcgacgagggcaagccc
gagctcaaggcgctcggcgcggtgtcgacgacgaccgcgggcgtgatcctgcgtgcgctg
gtcaacctcgaggccgagggtgcggacacgttcttcggtgagcccgagctggagcccaag
gatctgctgcgcgtcgacgatcaggggcgcggcgtcatcacgctgctggagctcggggcc
caggccgcgcgcccggtgatgttctcgacgttcctcatgtgggtgctggccgatctgttc
acgacgctgcccgaggtcggcgacgtcgacaagcccaagctggtgttcttcttcgatgag
gcgcacctgctgttcaacgacgcatccaaggcgttcctcgagcaggtcgagcagaccgtg
aaactgatccgctccaagggcgtcggcgtcttcttctgcacccagctgcccaccgacgtc
cccaacgacgtcctctcgcagttgggtgcccggatccagcacgcgctgcgcgccttcacg
cccgacgaccagaaggcgctcaccaagaccgtgcgcacctatcccaagaccaaggtctac
gacctcgaagaggcgctcacctcgctgggcatcggcgaggccgtggtgaccgtgctctcg
gagaagggtgcgcccaccccggtggcgtggacgcggatgcgcgcgccgcgctcgctgatg
gacacgatcggcgccgacgcgatctcggcggcggccaaggcgagcccgctgcaggccacc
tacgggcagaccgtcgaccgggattcggcctacgagcgtctggccgccaagctggctccg
ccggagggcggtgacgcgggcggcttcgccggcgtcgaggccaccggagaggccgccccg
atgccggccccggcgcagcccgaggagcccgggttcttcgagaagatggtcgcgagcccc
gcgttcaagagcgcgatgcgctcggcgggcaccgtgatcggccgcgagatcacccgcagc
atcttcggtaccggccgtcgccgccgctga |