Mycolicibacterium smegmatis MC2 155: MSMEI_5382
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Entry
MSMEI_5382 CDS
T02191
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msg
Mycolicibacterium smegmatis MC2 155
Pathway
msg03420
Nucleotide excision repair
msg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSMEI_5382 (pcrA)
03430 Mismatch repair
MSMEI_5382 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msg03400
]
MSMEI_5382 (pcrA)
Enzymes [BR:
msg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSMEI_5382 (pcrA)
DNA repair and recombination proteins [BR:
msg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSMEI_5382 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MSMEI_5382 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
DEAD
CarD_TRCF_RID
Terminase_6N
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFP41823
UniProt:
I7FSJ9
LinkDB
All DBs
Position
complement(5624414..5626765)
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AA seq
783 aa
AA seq
DB search
MTSPSATPFAAETDQLLDGLNPQQRQAVLHEGSPLLIVAGAGSGKTAVLTRRIAYLLAER
EVGVGQVLAITFTNKAAAEMRERVVQLVGPRAKAMWVSTFHSTCVRILRNQASLLPGLNS
NFSIYDSDDSRRLLMMIGKDLGLDTKRYSPRLLANGISNLKNELIGPEQAAAEASEASDE
MATVIAQVYGEYQRRLRAANALDFDDLIGETVAVLQAFPQIAQYYRRRFRHILVDEYQDT
NHAQYVLVRELVGHHLEDHDGVPPSELCVVGDADQSIYAFRGATIRNIEDFERDFPDATT
ILLEQNYRSTQTILNAANAVIARNTGRREKRLWTDAGQGELIVGYVADNEHDEARFVADE
IDALTDRHGYNYNDIAVFYRTNNSSRALEEVFIRAGIPYKVVGGVRFYERREIRDIVAYL
RVLDNPGDSVSMRRILNTPRRGIGDRAEACVAVYAENTGVSFNEALQAAAEGRVPMLNTR
SEKCIASFVQMLDDLRGKLDEELGDLVEAVLERTGYRRELEASSDPQDLARLDNLNELVS
VAHEFSIDLANAQALAEESDEPVDEDIPDTGVLAQFLERVSLVADADDIPEEGSGVVTMM
TLHTAKGLEFPAVFVTGWEDGMFPHMRALGDPNELSEERRLAYVGITRARQRLYLSRAKV
RSSWGQPMLNPESRFLREIPQELIDWRRIEAPTPAYAAPGRMSSSGGGGIGFGSPRPSPN
RPGGGRNKPLMVLQPGDRVTHDKYGLGRVEEVAGTGESAMSLIDFGSAGRVKLMHNHAPL
QKL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacttccccctctgccacccccttcgccgccgaaaccgaccagctcctggacggcctg
aacccgcagcagcgtcaggcggtgctccacgagggttcgcccctgctgatcgtcgcgggc
gcgggttcgggaaagactgccgtgctgacccggcgcatcgcgtacctgctcgctgagcgc
gaggtcggggtggggcaggtactggccatcacgttcaccaacaaggccgccgccgagatg
cgcgagcgcgtggtgcaactggtggggccgcgggccaaggccatgtgggtgtcgacgttc
cactcgacgtgcgtgcggatcctgcgcaaccaggcgtcgctgctgcccgggctgaactcg
aacttctcgatctacgactccgacgattcccggcgcctgctgatgatgatcggcaaggat
ctgggcctggacaccaagcggtactcgccgcggctgctggccaacgggatctccaacctc
aagaacgagctgatcggccccgaacaggccgccgccgaggcgtccgaggcctccgacgag
atggccaccgtcatcgcgcaggtgtacggcgaataccagcgccggctgcgcgcggccaat
gcgctggacttcgacgacctcatcggggagacggtcgcggtgctgcaggcgttcccgcag
atcgcgcagtactaccggcgccggttccggcacatcctggtcgacgagtaccaggacacc
aaccatgcgcagtacgtgctggtgcgtgagctcgtcgggcaccacctcgaggaccacgac
ggcgtgccgccgtcggagctgtgcgtggtgggtgacgccgaccagtcgatctacgcgttc
cgcggcgcgacgatccgcaacatcgaggacttcgagcgcgacttccccgacgcgacgacg
atcctgctggaacagaactaccggtcgacgcagacgatcctcaacgccgcgaacgcggtg
atcgcccgcaacaccgggcgtcgcgagaagcgcctgtggaccgacgcaggccagggtgag
ctgatcgtcggctacgtcgccgacaacgagcacgacgaggcccggttcgtcgccgacgag
atcgacgcgctcaccgaccggcacggctacaactacaacgacatcgcggtgttctaccgc
accaacaactcctcgcgtgcgctggaagaggtgttcatccgcgcgggcatcccgtacaag
gtcgtcggcggcgtgcggttctacgagcgccgcgagatccgcgacatcgtcgcctacctg
cgcgtgctcgacaatcccggcgactcggtgagcatgcggcgcatcctcaacacgccgcgc
cgcggcatcggcgaccgtgccgaggcgtgcgtcgcggtgtacgccgagaacaccggcgtg
agcttcaacgaggcgctgcaggccgccgccgagggccgcgtgccgatgctcaacacacgc
tcggagaagtgcatcgcgagcttcgtacagatgctcgacgacctgcggggcaagctcgac
gaagaactcggcgacctcgtggaggccgtgctggaacgcaccggctaccgccgtgagctc
gaggcgtcgagcgatccgcaggatctggcccgtctcgacaacctcaacgaattggtcagc
gtcgcacacgagttcagcatcgacctggccaacgcacaggccctggccgaggagagcgac
gagcccgtcgacgaggacatccccgacacgggcgtgctggcgcagttcctcgagcgggtg
tcgctggtcgccgacgccgacgacatccccgaagagggctccggtgtggtgacgatgatg
acgctgcacaccgccaagggcctggagttccccgcggtgttcgtcaccggttgggaggac
ggcatgttcccgcacatgcgggcactcggtgaccctaacgaactgtccgaggaacgccgc
ctggcctacgtcggcatcacgcgcgcccgccagcggctctacctcagccgggccaaggtg
cgctcgtcgtgggggcagcccatgctcaacccggaatcgcgcttcctgcgcgagatcccg
caggaactcatcgactggcgccgcatcgaggcgcccacgccggcgtacgccgcaccgggc
cgcatgtcctcctccggcggcggcggtatcggcttcggttcaccgcggccctcgccgaac
cgccccggcggtggccgcaacaagccgttgatggtgctacagcctggtgaccgcgtgacc
cacgacaagtacggtctcggccgcgtcgaggaggtcgcgggcaccggcgaatccgcgatg
tcgctcatcgacttcggcagcgccggccgcgtcaagctcatgcacaaccacgcgccgctg
cagaagctctga
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integrated database retrieval system
