Mycolicibacterium smegmatis INHR2: LI98_08860
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Entry
LI98_08860 CDS
T03432
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
msh
Mycolicibacterium smegmatis INHR2
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msh03016
]
LI98_08860
Enzymes [BR:
msh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LI98_08860
Transfer RNA biogenesis [BR:
msh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LI98_08860
Prokaryotic type
LI98_08860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AIU20248
UniProt:
A0A653FKH9
LinkDB
All DBs
Position
complement(1863657..1864586)
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AA seq
309 aa
AA seq
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MSTRELVVLGTASQVPTRLRNHNGYLLRWDNEGFLFDPGEGTQRQMLLAGVSASSVTHLC
LTHFHGDHCLGVPGIVQRMSLDHVAHPVEAHYPASGQEFFTRLRNASAFHDTVDVRENPV
EADGPVAIGAFGTLEARRLDHSVDSIGYRLTEPDSRRIRSDLLALYGIHGPAVGELQREG
TIRVGPDTEPEVVHLTQVSEPRPGQRFAFVMDTRLCDAVYALADGTDMLVIESTFLNEHA
GLALKYGHLTARQAARVAAECHVRKLVLTHFSQRYGDTQRHFEEAAEVYHGELVVADDLA
RIAVGHRSS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacgcgcgagctggtcgtcctcggtaccgcgagccaggttcccacgcgcctgcgc
aatcacaacggatacctgttgcgctgggacaacgagggtttcctgttcgatccgggcgag
ggcacccaacgccagatgctgctggcgggtgtctcggcgagttcggtcacgcacctgtgc
ctgacccacttccacggcgatcactgcctcggggtgcccggcatcgtgcaacgcatgtca
ctggatcacgtcgcgcatccggtcgaggcccactaccccgcctcggggcaggaattcttc
acccgtttgcgcaacgccagtgcgttccacgacaccgtcgacgtccgggaaaatccggtg
gaggcggacggaccggtcgccatcggtgcgttcggaaccctcgaagcgcgccggctcgat
cattccgtcgattcgatcggctatcggttgaccgaacctgactctcggcgcatacgctca
gatctgctggcgctgtatgggattcacggacccgctgtcggagaattgcagcgcgagggg
acgattcgggtgggcccggataccgaacccgaagttgtgcacctcacccaggtcagcgaa
ccgcggcccgggcagcggttcgccttcgtgatggacacccggttgtgcgacgcggtgtac
gcgctagccgacggcaccgacatgttggtcatcgagtcgacattcctcaacgaacacgcc
ggtctggcattgaaatacggccacctgaccgcacgtcaggccgcgcgcgtggcagcagag
tgccacgtgaggaaactcgtgctgacccatttctcacaacgctacggcgatacacagcgt
cacttcgaagaggcggccgaggtttaccacggggagctcgtcgtggcggatgacctggcg
cgcatcgccgttggacaccgctcgtcgtag
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