Mycolicibacterium smegmatis INHR2: LI98_08900
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Entry
LI98_08900 CDS
T03432
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msh
Mycolicibacterium smegmatis INHR2
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msh03032
]
LI98_08900
03400 DNA repair and recombination proteins [BR:
msh03400
]
LI98_08900
Enzymes [BR:
msh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LI98_08900
DNA replication proteins [BR:
msh03032
]
Prokaryotic type
DNA Topoisomerases
LI98_08900
DNA repair and recombination proteins [BR:
msh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LI98_08900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AIU20256
UniProt:
A0A653FL07
LinkDB
All DBs
Position
complement(1868701..1869717)
Genome browser
AA seq
338 aa
AA seq
DB search
MRLRRSVVDGPGIKRIRRGRGFSYEKPDGQAVTDRKVLQRIDDLVIPPAWKTVWICPHAS
GHIQAVGTDVAGRRQYLYHPQWQQERSEEKFDRVLEMSTGLHDWRQHVAVDLARRGLRRD
RVLALGLRLLDLGYFRAGGEKYAEENNSFGIATLQCEHVSVSSGAVEFDYPAKSGVRRTL
LVEDDDVVRAVRALQRHRKRGERFLAYQDSADWVEVHADDLNLRFKEMVGEDYTVKDLRT
WHGTVLAAEAFVDADPPVDPKVVKRVESAVMREVSEGLGNTPAVARSAYVDPRVVQAYRN
GITIQSAVRRAERVPWAGERQSVLDRATARLIRKAARG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcgtcgaagcgtcgtcgacggcccggggatcaagcggatccgcaggggccgc
ggcttcagctatgaaaagcccgacggacaggcggtaactgatcgcaaggtgctgcagcgc
atcgacgatctcgtcatcccaccggcgtggaagacggtgtggatctgcccccatgcctcc
ggccacatccaggctgtcggcaccgatgtcgccggcaggcgccagtacctgtaccacccg
cagtggcagcaggagcgcagcgaggagaagttcgaccgtgtactggaaatgtctacaggg
cttcacgattggcggcagcatgtggcagtcgacctcgcgcggcggggcctgcgacgcgac
cgggtgctggcactggggctgcgcctgctcgacctcgggtacttccgcgcgggaggcgag
aaatacgccgaggagaacaactcgttcggtatcgcgacactgcagtgcgaacacgtgagc
gtgagcagcggcgcagtggagttcgactatccggctaagagcggggtgcggcgtacgttg
ctcgtcgaggacgacgacgtggtccgtgccgtgcgggcactgcagcgacaccgcaagcgc
ggggaacgttttctcgcctaccaggattcggccgattgggtggaggtccatgccgacgac
ctcaatcttcgcttcaaagagatggtcggcgaggactacacggtcaaggacctgcgcacc
tggcacggtacggtgctggccgccgaggcgttcgtcgacgccgatccgccggtggatccc
aaagtggtcaagcgcgtcgagtcggcggtgatgcgggaggtctccgaggggctggggaac
acccctgcggtcgcgcgcagcgcctacgtcgacccacgggtggtgcaggcctaccgcaac
ggcatcacgatccagtccgcggtgcgccgggccgagcgtgtcccgtgggctggcgagcgc
cagagcgtgctggaccgggcaacggcccggctgatccggaaagccgcccgcggttga
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