Mycolicibacterium smegmatis INHR2: LI98_09830
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Entry
LI98_09830 CDS
T03432
Name
(GenBank) siderophore-interacting protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
msh
Mycolicibacterium smegmatis INHR2
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msh03000
]
LI98_09830
Transcription factors [BR:
msh03000
]
Prokaryotic type
Helix-turn-helix
Other families
LI98_09830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_14
HTH_8
HTH_30
HTH_50
HTH_29
HTH_28
HTH_22
Sigma54_activat
HVO_A0261_N
HTH_23
HTH_11
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AIU20436
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Position
complement(2050852..2052603)
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AA seq
583 aa
AA seq
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MVRHADTPTDAQRAREQFLSTGALQPDAVASSVLNSWQRSRELHVHPDRVELPYVRDPDT
DTPLMHAAAPVLRRMAEDLSDQSVSVVLTSADGLVLDRVAADTEFERVLDDVRLARGYSY
AEEFAGTNGIGTALETGRPAFIRGSEHYVGTLGGLACAGSPIREPVTRRILGVIDLTCRA
RQADPLLFVLAKSAGSQIEDRLRTMNNETETALLDAYLKQSRRYPGGVLAIGGDVVLMNR
YLRQALDAADQTVLLDHAAELTRSSFTSTTVAHLPSGASVKISAAERIIVGVRSDSVVFH
VSVHVAESIPVRSSQHIPRLAGQSSSFRRSAQQVERCYRDREWVVIEGERGSGRTYLGYS
VVHFVTPERSIPVLHIDNFDTPESFVAAFESETDSADFAVIVSDVDELPDEVLNPMAAIM
QTRAGRGWIAATTSTERDSQLVDLLMLPFFTHTVTVPALRHRIEDLQELVPMILNELSRG
EARMDGEAMRQLAKLPWPGNIAQLRHVLTETVRRQRSGVIGVDKLPAECRSVTRRKLTPL
EAMERDAIVRSLLENDGNKADAAAALGMSRATIYRKIKDFGIA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggtcagacatgccgacacgcccacggacgcccagcgcgcccgggagcagttcctctcc
accggcgccctgcaaccggatgccgttgcttcgagcgtgctcaactcctggcaacgatca
cgcgaactgcacgtccaccctgatcgcgtcgaactgccctatgtgcgcgaccccgacacc
gacacgccgctgatgcacgcggccgcccccgtgctgcgacggatggccgaggatctctcc
gatcagtcggtgagcgtggtgctgacctccgcggacggcttggtgctggaccgtgtcgcg
gccgacaccgagttcgagcgggtgctcgacgatgtgcgcctggcgcgtgggtacagctac
gccgaggagttcgcgggcaccaacggcatcggcacggcgctggagaccggccggccggcc
ttcatccgaggcagcgagcactacgtcggaacgctgggcgggctggcctgcgccggttct
cccatccgcgaacccgtcacccgccggatcctcggcgtcatcgatctgacctgccgggcg
cggcaggccgacccgctgctgttcgttctcgccaagagcgcgggcagccagatcgaggac
cgccttcgcaccatgaacaacgagaccgaaaccgcgctcctcgacgcatatctgaagcag
agtcgccgctatccgggcggggtgctggcgatcggcggggacgtcgtgctgatgaaccgc
tacctccgccaggcgctcgacgccgccgatcagacggtgctgctggatcacgccgcggaa
ctgacccgatcgtcgttcacctcgacaacggtggcccatctccccagcggtgcgtcggtg
aagatctcggccgccgaacgcatcatcgtgggcgtccgcagcgacagcgtcgtcttccac
gtctctgtccatgtggccgagagcattccggtgcgcagctctcaacacatcccccgcctt
gccggccagagcagttcgttccgccgtagcgcccagcaggtggaacgctgctaccgcgac
cgggaatgggtggtcatcgagggcgaacgaggctctggcagaacatatttggggtattcg
gtagtgcatttcgtcacccccgaacggtcgatacccgtgctgcacatcgacaacttcgac
acgcccgagagcttcgtcgccgccttcgaatccgaaaccgactccgccgacttcgcggtg
atcgtctccgacgtcgacgaactgcccgacgaggtactgaacccgatggcggccatcatg
cagacccgcgcgggccgcggctggatcgccgcgaccaccagcaccgaacgtgactcgcag
ctggtggacctgctcatgttgccgttcttcacccacacggtcaccgtgcctgccctgcgt
caccgaatagaggacctccaagagctggttccgatgatcctcaacgaattgagccgtggc
gaagcccgcatggatggtgaagccatgcggcagttggccaaactgccgtggcccggcaac
atagcccagctgcgccatgtgctgaccgagaccgtgcgccgccaacggtcgggggtgatc
ggcgtggacaagctacccgcggaatgccggtcggtcacccgccgcaaactcacgcccctg
gaggcaatggagcgtgacgcgatcgtgcgcagcctgttggagaacgacggcaacaaggcc
gacgccgcagccgctctggggatgtcacgagcgacgatctatcgcaagatcaaggacttc
gggatcgcgtga
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