Mycolicibacterium smegmatis INHR2: LI98_12825
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Entry
LI98_12825 CDS
T03432
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
msh
Mycolicibacterium smegmatis INHR2
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msh03400
]
LI98_12825
Enzymes [BR:
msh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LI98_12825
DNA repair and recombination proteins [BR:
msh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LI98_12825
Prokaryotic type
LI98_12825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AIU21003
UniProt:
A0A653FKB9
LinkDB
All DBs
Position
complement(2658469..2659827)
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AA seq
452 aa
AA seq
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MPTLLWFRRDLRCADHPAVLDAAQGDADVLACYVLDPRLTGSSGDRRLAYLYGALRDLRE
QLGGKLLVTRGRPEQRIPELAAAIGAASVHVSGDFSPFGLRRDEAVRAALADLPGDVGLY
ATGSPYLVTPGRITKDDGNPYRVFTPFFRAWRDHGWRAPADSGPGSARWIDPSEVPGGAE
IPEPPTDLELPAGETAARAQWRAFVRESLRDYSSNRNRPDLDATSRMSAHLKFGTIHPRT
MAADLERDGAGDGAAAYLRELAFRDFYAAVLHHWPDSAWWNWNRTFDAIETDEGPDAQRL
FDAWKAGMTGFPIVDAGMRQLAATGFVHNRVRMIVASFLVKDLHLPWQWGARWFLDQLVD
GDIANNQHGWQWTAGCGTDAAPYFRVFNPTKQGEKFDPDGVYIRRWVPELADPATVPDVH
RIDGSRPADYPEPIVDHAQERAEALRRYGRLS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcccacactgctgtggttccggcgtgacctccggtgcgccgaccacccggcggtgctc
gacgccgcgcagggcgacgccgacgtgctggcctgttatgtactcgatccgcgcctgact
ggttcgtcgggcgaccgccgcctggcctacctgtacggggcgctgcgcgacctgcgcgag
cagctcggcggcaagctgctggtcacccgtggccgtcccgagcagcgaattccggaactt
gccgcggcgatcggagccgcctcggtacacgtgtcgggcgacttctcgccgttcggcctg
cgccgtgacgaggccgtgcgcgcggcgctggccgacctgcccggtgacgttggtctgtac
gcgaccggttcgccgtacctcgtgacgcccgggcgcatcaccaaggacgacggcaacccg
taccgcgtgttcacgccgttcttccgcgcgtggcgcgaccacggatggcgcgcacccgcc
gactcggggcccgggtccgcccgctggatcgacccgtcggaggtgcccggcggtgccgag
atccccgagccgcccaccgatcttgagctgcccgcaggcgagaccgctgcgcgtgcgcag
tggcgcgcattcgtccgggaatcgttgagggattacagctccaaccgcaaccgtcccgat
ctcgacgcgacgagccgcatgtcggcccacctcaagttcggcacgatccatccgcggacc
atggcggcggacctcgaacgcgacggcgccggcgatggggccgccgcctatctgcgtgag
ctcgcgttccgcgacttctacgccgcggtgctgcaccactggcccgacagcgcctggtgg
aactggaaccgcaccttcgacgcgatcgagaccgacgagggaccggacgcccagcggctg
ttcgacgcgtggaaggccggtatgaccggtttcccgatcgtcgacgccggtatgcgccag
ctcgctgcgaccgggttcgtgcacaaccgggttcgcatgatcgtcgcgtcgttcctggtc
aaggatctgcatctgccgtggcagtggggcgcgcggtggttcctcgaccaactcgtcgac
ggcgacatcgccaacaaccagcacggctggcagtggacggccggatgcggcaccgacgcc
gcgccctacttccgggtgttcaaccccaccaagcaaggcgagaagttcgatcccgacggc
gtctacatccggcggtgggtgcccgaactcgccgacccggccacggttcccgacgtgcac
cgcatcgacggctcccgtcccgcggactatcccgagccgatcgtcgaccacgcccaggag
cgcgccgaggcgctgcgtcgttacggccggctgtcctga
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