Mycolicibacterium smegmatis INHR2: LI98_15240
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Entry
LI98_15240 CDS
T03432
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
msh
Mycolicibacterium smegmatis INHR2
Pathway
msh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LI98_15240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msh03400
]
LI98_15240
Enzymes [BR:
msh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LI98_15240
DNA repair and recombination proteins [BR:
msh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LI98_15240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
AIU21465
LinkDB
All DBs
Position
3133506..3135506
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AA seq
666 aa
AA seq
DB search
MTLTRRAAEHEPIARVLPMLSVPHLDREFDYLVSEELSDNAQPGVRAKVRFHGRLVDAFI
LERRSDTDHEGRLGWLDKVVSPEPVLTTDVRRLVDAVAARYAGTRPDVLRLAIPPRHATV
EKQTPAEPEPIPAIDVDSSGWARYARGEQFLTALGEGRAARAVWQALPGEQWPQRLAEAA
AATVNAGQGVLAIMPDQRDVDALHAAVTAHVPESRVVALSAGLGPSARYRRWLAALRGHA
RVVIGTRSAVFAPVADLGLILVWDDGDDNLAEPRAPYPHAREVAMLRAHQLRCAAVIGGY
ARTAEAHALVRTRWAHDLVATRSVVRSVAPRVVALEESRYQQERDPAAHSARLPSMALQA
ARTALDADRPVLIQVPRRGYVPALACARCRTVTRCRHCTGPLALPDRDSAAAQCRWCGRA
EPALRCARCGSDAVRAVVVGARRTAEELGRAFPGTPVITSGGDTVVSDVRGTRALVVSTP
GAEPAADGGYGAALLLDAWALLGRQDLRAAEDTLRRWMAAAALVRPRADGGVVAVVAESV
LPTVQALIRWDPVGHADAELDSRGEVGLPPAVHMAAVDGTPKAVTALLDHALLPEGAERL
GPVDLPFGARRPPGLDADAEVSRMLVRVPRAGGLALAAALRRATAVLSARHDQEPSRVQI
DPLHIG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctcacccggcgtgcagcagaacacgaaccgatcgcccgggtactgcccatgctg
tcggttccacatctggaccgcgagttcgactacctggtgtcggaggaactgtccgacaac
gcccagcccggtgtgcgggccaaggtgcgcttccacggcaggctggtcgacgcgttcatc
ctggaacgccgctccgacaccgaccacgagggcaggctcggctggctcgacaaggtggtc
tcaccggaacccgtgctgaccaccgacgtccggcgcctggtcgacgcggtggccgcgcgg
tacgcgggcacgcgccccgatgtgctgcgcctggcgatcccgccacgccacgccaccgtc
gagaagcagacgcccgccgagcccgaaccgattcccgcgatcgacgtcgacagcagcggc
tgggcccggtatgcgcgcggcgagcagttcctcaccgcgctcggtgagggacgcgccgcg
cgcgccgtgtggcaggcgctgcccggcgagcagtggccgcaacggctggccgaggcggcc
gcggcgacggtcaacgcgggccagggcgtgctggcgatcatgcccgaccagcgcgatgtc
gacgccctgcacgcggccgtcaccgcccacgtccccgagtcacgcgtggtggcgctgtcg
gcggggctcgggccctcggcgcggtaccgccgctggctcgcggcgctgcgcggccacgcg
cgggtggtgatcggaacccgcagcgcggttttcgcgccggtggccgatctgggcctgatc
ctggtgtgggacgacggcgacgacaacctcgccgaaccgcgtgccccgtatccgcacgca
cgtgaggtcgccatgctgcgtgcccaccaattgcgttgtgcggcagtcatcggcggctat
gcgcgcaccgcggaggcccacgcgctggtgcggacgcggtgggcacacgacctggtggcg
acccggtcggtggtgcgcagcgtcgcgccgcgcgtcgtcgcgttggaggagagcaggtat
cagcaggagcgggacccggccgcgcacagcgcacgactgccctcgatggcgctgcaggcc
gcgcgcacggcgctggacgccgaccgcccggtgctcatccaggtgccgcggcgcgggtat
gtgcccgcactcgcgtgcgcacggtgccgcaccgtgacccggtgcaggcactgcacgggc
ccgctcgcgctgcccgatcgcgacagcgccgccgcccagtgccgctggtgcgggcgggcc
gaacccgcgttgcgctgtgcgcgttgtggttccgacgcggtacgcgcggtcgtggtcggg
gcccgccgcaccgccgaggaactcgggcgcgcgttccccggcacaccggtgatcacctcg
ggcggtgacaccgtggtgtccgacgtacgggggacacgtgcactcgtggtgtcgaccccg
ggcgccgaacccgccgccgacggcggttacggcgcggcgcttctgctcgacgcgtgggcg
ctgctgggcagacaggacctgcgcgccgccgaggacacgctgcggcggtggatggcggcc
gcggcgctcgtgcggccccgcgccgacggcggtgtggtcgcggtggtagccgaatcggtg
ctgccgaccgtgcaggcgctcatccgctgggatcccgtgggccacgccgacgccgagctc
gacagccgcggtgaggtgggactgccgcccgcggtacacatggccgcggtggacggcacc
ccgaaagccgtgacggcgctgctggaccacgccctgttgcccgagggggccgagcggttg
ggtccggtcgacctgccgttcggtgcccgcaggccacccggtctcgacgccgatgccgag
gtcagtcgcatgctcgtacgcgtgccccgcgcgggcggcctggcgctcgcggccgcgctg
cggcgcgcgaccgcggtgctaagcgcacgccacgaccaggagccatctcgcgtccagatc
gaccctttgcacatagggtga
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