KEGG   Mycolicibacterium smegmatis INHR2: LI98_19080
Entry
LI98_19080        CDS       T03432                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
msh  Mycolicibacterium smegmatis INHR2
Pathway
msh03030  DNA replication
msh03410  Base excision repair
msh03420  Nucleotide excision repair
msh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LI98_19080
   03410 Base excision repair
    LI98_19080
   03420 Nucleotide excision repair
    LI98_19080
   03440 Homologous recombination
    LI98_19080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msh03032]
    LI98_19080
   03400 DNA repair and recombination proteins [BR:msh03400]
    LI98_19080
Enzymes [BR:msh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LI98_19080
DNA replication proteins [BR:msh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LI98_19080
DNA repair and recombination proteins [BR:msh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LI98_19080
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LI98_19080
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_5 NYN_YacP HHH_2 CNV-Replicase_N DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AIU22205
UniProt: A0A653FGI6
LinkDB
Position
complement(3908840..3911566)
AA seq 908 aa
MSPAKTATKKTPAKAADDTPTLMLLDGNSLAFRAFYALPAENFKTQSGLTTNAVYGFTAM
LINLLRDEQPTHIAAAFDVSRQTFRKDKYPEYKEGRSATPDEFRGQIDITKEVLGALGIT
VLAEPGFEADDIIATLATQAEQEGYRVLVVTGDRDSLQLVSDQVTVLYPRKGVSELTRFT
PDAVVEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTATKWIVEYGSLQALVDNVDAV
KGKVGDALRANLSSVILNRELTDLIRDVPLPQTPDTLRMQPWNRDQIHRLFDDLEFRVLR
DRLFETLVAVEPEVEHGFDVRGRALEPGELAAWLSEHSLGSRFGVAVVGTHKAYDADATA
LAIVAADGDGRYIDTSTLTPEDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLRGVT
SDTALAAYLVRPGQRSFTLDDLAVRYLHRELRAETPEQQQLSLLDDSDGVDEQAVQTVIL
RACAVLDLADALDQELARIDSLSLLSRMELPVQRTLAEMEHAGIAVDLGMLEQLQSEFAD
QIRDAAEAAYSVIGKQINLGSPKQLQAVLFDELEMPKTKKTKTGYTTDADALQSLFEKTG
HPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIR
TEAGRRIRDAFVVGEGYAELMTADYSQIEMRIMAHLSRDAGLIEAFNTGEDLHSFVASRA
FSVPIDEVTPELRRRVKAMSYGLAYGLSAYGLAQQLKISTEEAKVQMEQYFDRFGGVRDY
LRDVVDQARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI
NVDQAIKDAGLRSRILLQVHDELLFEVSEGEQGELEQLVREHMGNAYPLDVPLEVSVGYG
RSWDAAAH
NT seq 2727 nt   +upstreamnt  +downstreamnt
gtgagccccgccaagaccgcaaccaagaagacaccggccaaagccgctgacgacacgccc
accctgatgttgctggacggcaactcgctggccttccgggcgttctatgcgttgcccgcc
gagaacttcaagacgcagagcggcctgaccaccaacgcggtgtacggcttcaccgccatg
ctcatcaacttgctgcgtgacgagcagcccacgcacatcgccgcggcgttcgacgtgtcc
cggcagacgttccgcaaggacaagtaccccgagtacaaggagggccgctcggcgacgccc
gacgagttccgcgggcagatcgacatcaccaaagaggtgctcggggccctcggcatcacg
gtgctcgccgaacccgggttcgaggccgacgacatcatcgccacgctcgccacgcaggcc
gagcaggagggctaccgcgtcctggtggtcaccggcgaccgtgactcgctgcagctggtg
agcgaccaggtcaccgtgctctacccgcgcaagggtgtcagcgagctcacccggttcacg
cccgacgccgtggtggagaagtacggcctcacgccgcagcaataccccgacttcgcggcc
ctgcgcggcgacccgagcgacaacctgcccggcatccccggcgtgggggagaagaccgcc
accaagtggatcgtcgagtacgggtcgctgcaggcgctggtcgacaacgtcgacgcggtc
aagggcaaggtcggcgacgcgctgcgggccaacctgtcgagcgtcatcctcaaccgcgag
ctcacggatctgatccgggacgtgccgctcccgcagacccccgacacgctgcgcatgcag
ccgtggaaccgcgaccagatccaccggctgttcgatgacctggagttccgggtcctgcgc
gaccgcctgttcgagacgctggtcgcggtcgagccagaggtcgagcacggtttcgacgtg
cgcggccgcgcgctggagcccggtgagctcgccgcgtggctctccgagcacagcctcggc
agccggttcggcgtcgccgtcgtcggcacccacaaggcgtacgacgccgatgcgaccgcg
ctcgcgatcgtcgcggccgacggcgacggccgctacatcgacacctcgacgctgacgccc
gaggacgaggccgcgctggcgtcgtggctcgccgatccgggcccgccgaaggcgctgcac
gaggccaagctcgcgatgcacgatctggccgggcgcggctggacgctgcggggcgtcacg
tcggacaccgcgctcgcggcgtacctggtgcggcccgggcagcgcagcttcaccctcgac
gacctcgcggtgcgctacctgcatcgcgaactgcgcgcggaaacccctgagcagcagcag
ctttcactgctcgacgattctgacggcgtcgacgagcaggccgtgcagaccgtgatcctg
cgggcctgcgccgtgctggacctggccgacgcgctcgaccaggagctcgctcgcatcgac
tcgctgtcgctgctgagccgcatggagctgccggtccagcggacactggccgagatggag
catgccggcatcgcggtcgacctcggcatgctcgaacagctgcagagcgagttcgccgat
cagatccgcgacgcggccgaggccgcctactcggtgatcggcaagcagatcaacctcggt
tcgcccaaacagttgcaggccgttctgttcgacgagctggagatgccgaagaccaagaag
accaagaccggttacaccaccgacgccgacgcgctgcaatcgctgttcgagaagaccggc
catccgttcctgcagcatctgctggcgcaccgcgacgccacccgtctcaaggtgaccgtc
gacgggctgctcaactcggtggcctccgacgggcgcatccacacgacgttcaaccagacc
atcgccgcgaccggccggctgtcgtccaccgagccgaacctgcagaacatcccgatccgt
accgaggccgggcgccggatccgtgacgcgttcgtggtgggcgagggttacgccgagctc
atgaccgccgactacagccagatcgagatgcggatcatggcgcacctgtcgcgcgatgcg
ggcctcatcgaggcgttcaacaccggtgaggatctgcactcgttcgtcgcgtcgcgggcg
ttctcggtgccgatcgacgaggtgacgcccgagttgcgccgccgcgtgaaggccatgtcc
tacggcctggcgtacggcctcagtgcctacgggctcgcgcaacagctcaagatctccacc
gaagaggcgaaggtgcagatggagcagtacttcgaccggttcggcggggtgcgtgactat
ctgcgtgacgtggtcgaccaggcccgcaaggacggttacacctcgacggtgctgggccgc
aggcggtatctgcccgagctcgacagcagcaaccgccaggtccgcgaggcggccgagcgt
gcggcgctcaacgccccgatccagggcagcgcggccgacatcatcaaggtcgcgatgatc
aacgtcgaccaggcgatcaaggatgctgggctgcgctcgcggatcctgctgcaggtccac
gacgagttgctgttcgaggtctcggaaggggagcagggggagctcgaacagctggtccgt
gagcacatgggcaacgcgtatccgctcgacgtgccacttgaggtgtcggtggggtacggc
cgcagctgggacgccgcggctcactga

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