Mycolicibacterium smegmatis INHR2: LI98_23565
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Entry
LI98_23565 CDS
T03432
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
msh
Mycolicibacterium smegmatis INHR2
Pathway
msh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LI98_23565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msh02000
]
LI98_23565
Transporters [BR:
msh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LI98_23565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
AIU23060
LinkDB
All DBs
Position
4864800..4865990
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AA seq
396 aa
AA seq
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MRNAVRTAFVLAACATLVAACSDSQQNGGGEGGSPPQMEPLSAVGDGEGQLNLVAWAGYA
EDGSNDPAVDWVTPFEQQTGCQVNVKVGNTSDEMVQLMRSGQYDGVSASGDATLRLIYAG
DVAPVNTDLVPNYATVSDFLKDKPWNSVDGQMYGVPHGWGANLLMYNVNVVRDAPNSWAA
VFDDAAKYRGKVTAYDSPIYIADAALYLSKSKPELGIEDPYSLTPEQLDAATELLKTQRE
NIGEYWSDYTKEVQAFESGTSVIGTTWQVIANTIGADNKVQVNTVLPKEGSTGWSDTWML
SSKAAHPNCMYKWMDWIISPEVNAQVAEYFGEAPAQTKACEHTTQKDFCDIYHATDADFA
AKIAYWTTPQTKCVDGSGDGCTAYSEWVDKWQQVKG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgccgtgcgtaccgcgttcgtgctcgccgcgtgtgcgacgctcgtcgccgcc
tgctcggattcgcagcagaacggcggcggtgagggcggctcaccaccgcagatggaaccg
ctgagcgccgtgggcgacggcgaaggccagttgaacctggtcgcgtgggccggttacgcc
gaggacggctccaacgatccggcggtcgactgggtgacaccgttcgagcagcagaccggg
tgccaggtgaacgtgaaggtgggcaacacctccgacgagatggtgcagttgatgagaagc
ggccagtacgacggtgtctcggcatccggcgacgccacgctgcggctcatctacgccggt
gacgtcgcgccggtgaacaccgatctggtgcccaactacgcgacggtctcggacttcctc
aaggacaagccgtggaactccgtcgacggccagatgtacggggttccacacggctggggc
gcaaacctgttgatgtacaacgtcaacgtggtgcgcgacgcccccaattcgtgggccgcg
gtgttcgacgacgccgccaagtacaggggcaaggtcaccgcgtacgactcccccatctac
atcgccgacgcggcgctgtacctgtcgaagtccaagccggaactcggcatcgaggacccg
tactcgctgacacccgaacaactcgacgccgcaaccgaactgctcaagacccagcgcgag
aacatcggcgagtactggtcggactacaccaaggaggtgcaggccttcgagtcgggcacc
tcggtgatcggcaccacctggcaggtcatcgccaacaccatcggcgcggacaacaaggtc
caggtcaacaccgtgctgcccaaggaggggtcgaccggttggtcggacacctggatgctg
tcgtcgaaggccgcccacccgaactgcatgtacaagtggatggactggatcatctctccc
gaggtcaacgcacaggtcgcggagtacttcggcgaggcgccggcccagacgaaggcgtgc
gaacacaccacccagaaggacttctgcgacatctaccacgcgaccgacgccgacttcgcc
gccaagatcgcctactggaccacaccgcagaccaagtgcgtcgacggaagcggcgacggc
tgcacggcctacagcgagtgggtcgacaagtggcagcaggtcaagggctga
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