Mycolicibacterium smegmatis INHR2: LI98_24890
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Entry
LI98_24890 CDS
T03432
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
msh
Mycolicibacterium smegmatis INHR2
Pathway
msh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LI98_24890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msh03400
]
LI98_24890
Enzymes [BR:
msh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LI98_24890
DNA repair and recombination proteins [BR:
msh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LI98_24890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIU23318
LinkDB
All DBs
Position
complement(5126833..5127705)
Genome browser
AA seq
290 aa
AA seq
DB search
MGPIFGHSGRVSPQLLPHPRTGQLFPSPVPPGTGWPGDPATPSTPVAKTPAQVRRLAASA
KTLDDLDAMISVCRACPRLVAWREEVAVTKRKSFADQPYWGRPATGFGPEAPRILIAGLA
PAAQGANRTGRVFTGDRSGDFLFAALHRAGLANQAVCVDAADGMRLIDTRMAAAVRCAPP
GNAPEPAERATCAPWLAAEWRLVGPSVAVIVALGGFAWRAALELIADRPKPAPKFGHGAT
ATLTTAYGDVTLLGCYHPSQQNTFTGRLTPDMLDDIFELAKQIGNERDGQ
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgattttcgggcacagtggacgggtgtcaccgcaacttctgccgcatccgcgc
accggtcagctgttcccgtcgccggtgccgccgggcacggggtggcccggtgacccggcc
acaccgtcgacccccgtggccaagaccccggcgcaggtgcgccggctggcggcctcggcc
aagacgctcgacgacctcgacgcgatgatctcggtgtgccgggcctgcccgcggctggtg
gcatggcgtgaagaggtcgcggtcaccaaacgcaagtcgttcgccgatcagccgtactgg
ggcaggcccgcaaccggattcggtcccgaggcgccgcgcatcctcatcgccgggctggct
cccgccgcgcagggtgccaaccgtaccggccgcgtgttcaccggcgaccgctccggtgac
ttcctgttcgcggcgctgcaccgcgcgggcctggcgaaccaggccgtgtgcgtcgacgcg
gccgacggcatgcggctgatcgacacccgcatggcggctgccgtgcggtgcgccccgccc
ggcaacgccccggaaccggccgagcgtgcgacgtgcgcgccgtggctggccgccgagtgg
cgcctggtgggcccgtcggtcgccgtgatcgtcgcgctgggcgggttcgcgtggcgtgcg
gcgctcgaactcatcgccgaccgccccaaacccgcgcccaagttcgggcacggcgcgacc
gcgacgttgaccaccgcatacggcgacgtcacgctgctgggctgctaccaccccagccag
cagaacaccttcaccggacggctcacaccggacatgctcgacgacatattcgagttggcc
aagcagatcgggaacgaacgtgacgggcaatga
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