Mycolicibacterium smegmatis INHR2: LI98_24955
Help
Entry
LI98_24955 CDS
T03432
Name
(GenBank) nuclease
Organism
msh
Mycolicibacterium smegmatis INHR2
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_30
AAA_11
UvrD_C_2
AAA_19
NPHP3_N
nSTAND6
AAA_22
ResIII
AAA_16
NAT10_TcmA_helicase
AAA
PDDEXK_1
DUF2779
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIU23330
UniProt:
A0A653FH51
LinkDB
All DBs
Position
5139077..5142526
Genome browser
AA seq
1149 aa
AA seq
DB search
MFVTEDGGSGPRVIYSASDLAAAARCEYALLRAFDAQLGRGPAVSSEDELLKRTAQLGGE
HEQRHLDELREGSEITVIGRPRYTVPGLTAAANATLAAVTQRAPVIYQAAMFDGRFAGFA
DFLILSDGQYRLRDTKLARSVKVEALLQLAAYSETLSAAGVPVAPEVELVLGDGAVATYP
VDELLPVYRPRRAALEHLLDAHLASGEPVSWEDTEIRACFRCPECEVQVRAHDDLLLVAG
MRTSQRARLIDAGITTVADLAARRDDEPVEGLHPRIAQGLTAQARLQRAPRTGKKPPYEV
VDPQPLMSLPNPDRGDLFFDFEGDPLWTDDGVQWGLEYMFGVLGTAPRADEDFHPLWAHN
RREERQALRDFLALVRKRRKRHPHMHVYHYAAYEKTALLRLAGRYGEGEDEVDELLRAGV
LVDLYPLVRKSIRVGTENYSLKSLEPLYMGAQLRDGDVTTATDSITQYGLYCTLRAEGRD
DEAALVLKEIEDYNLYDCVSTRKLRDWLINRAIECSVPPLGAQPVGRDTAPEPEDQIART
LRRFVGDDERTPQQQAVAMIAAARGYHRREDKPFWWSHFDRLNHPVEEWSDGAGVFVADT
AHVEVDWHTPPRARKPQRWVRLTGAMAAGELSREMYALYEPPAPSGLTDDPERRAFGSVQ
VLEADDASAPTEVLICEREPKEGGTFHQLPFALTPGPPIRTTALQNSIEATAAQIAEGLP
RLPGNAVVDILLRRPPRTRSGGPLPHGQAAKHELITAALLDLDSSYLAVHGPPGTGKTFT
SAAVIARLVNRHHWRIGVVAQAHAVVENLFRDVIAADVPADAVAKKPHGDNACWTELSEK
EYPDFLDQHTGTGCVIGGTAWDFANPVRIPPGSLDLLVVEEAGQYSLANTIAVAPAAHNL
LLLGDPQQLPQVSQGTHPEPVDTSALGWLVDGHHTLPAELGYFLDCSYRMHPAVCAAVSR
LSYDNRLRSVDDVTAARHLDGQEPGVHVLLVDHDGNATDSPEEAQVIVAEIRRLLGAAWT
DERGTVPLGQDHVLVVTPYNAQVVTMRRYLDAAGLTDVRVGTVDKFQGQQAPVVFISMVA
SSVDDVPRGISFLLNRNRLNVAVSRAKYAAVIVRSAALTEYLPSTPAGVVELGAFLALPD
ALPDALNTV
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtcaccgaggacggcggtagcggaccgcgggtgatctacagcgcgtcggacctc
gcggccgccgcgcgctgtgagtacgcgctgctgcgggcgttcgacgcccagctgggacgc
ggaccggcggtgtcttcggaggacgaacttctcaagcgcaccgcgcaactcggcggggag
cacgaacagcggcatctcgacgagttgcgcgagggctcggagatcacggtcatcgggcgc
ccgcgctacaccgtgccgggcctcacggccgcggccaacgcgacgctcgccgcggtcacc
cagcgtgcaccggtgatctatcaggccgcgatgttcgacgggcggttcgccgggttcgcg
gatttcctgatcctctccgacgggcagtaccgcctgcgcgacaccaagctggcccgctcg
gtcaaggtcgaggcgctgctgcagctcgcggcgtacagcgagacgctgagcgccgcgggc
gtacccgtcgcgccggaggtcgaactggtgctcggcgacggcgccgtcgccacctacccc
gtcgacgaactgctgcccgtgtaccggccgcgccgcgcggcgcttgagcacctgctcgac
gcgcacctggcctccggggaaccggtcagctgggaggacaccgaaatccgcgcgtgcttc
cgctgccccgagtgcgaggtccaggtgcgtgcgcacgacgacctgctgctcgtcgcgggt
atgcgcaccagccagcgcgcccggttgatcgacgcgggcatcaccacggtcgccgatctc
gccgcgcgtcgcgacgacgagccggtcgagggcctgcacccacgcatcgcgcaggggctg
accgcgcaggcgcggttgcagcgcgcaccgcggaccggcaagaaaccgccgtacgaggtg
gtggacccgcagccgctcatgtcgctgcccaaccccgaccgcggtgatctgttcttcgac
ttcgagggtgacccgctgtggaccgacgacggcgtgcagtggggcctggagtacatgttc
ggcgtgctgggcaccgcgccgcgggccgacgaggacttccacccgctgtgggcccacaac
cgccgcgaggagcggcaggcgctgcgcgacttcctggcgctggtgcgcaaacgccgcaag
cgtcatccgcacatgcacgtctaccactacgcggcgtacgagaagaccgcgctgctgcgc
ctggccgggcgttacggcgaaggcgaggacgaggtcgacgaactgctgcgcgcaggtgtg
ctggtggacctgtatccgctggtgcgcaagagcattcgcgtgggaaccgagaactacagc
ctgaaatcccttgagccgctgtacatgggtgcgcagttgcgtgacggcgacgtcaccacc
gcgaccgattccatcacgcagtacgggctctactgcacgctgcgcgccgagggccgcgac
gacgaggccgcgctggtgctcaaggagatcgaggattacaacctctacgactgcgtgtcg
acgcgcaagctgcgggactggctgatcaaccgggcgatcgagtgcagcgtgccgcccctt
ggcgcgcaaccggtcggccgcgacaccgcacccgaacccgaggaccagatcgcgcgcacg
ctgcgccgcttcgtcggcgacgacgagcgcaccccgcagcagcaggctgtcgccatgatc
gcggccgcgcggggctaccaccgtcgcgaggacaagccgttctggtggagccacttcgac
cggctcaaccacccggtcgaggaatggtctgacggcgcaggcgttttcgtcgccgacacc
gcgcacgtcgaggtcgactggcacaccccgccgcgggcgcgcaagccccagcggtgggtg
cgcctcaccggcgccatggccgccggggaactcagccgcgagatgtacgcgctctacgag
ccgccggccccctccggcttgaccgacgatcccgagcgccgcgcgttcgggtcggtccag
gtgctcgaggccgacgatgcgtccgcacccaccgaggtgctgatctgcgagcgggaaccc
aaggagggcggcacctttcaccagttgccgttcgcgctgacgccgggcccgcccatccgc
accaccgcgctgcagaattccatcgaggccacggccgcgcagatcgccgaaggacttccc
cggctacccggcaacgccgtcgtcgacatcctgctgcgcaggccgccgcgcacccgcagc
ggcggcccgctgccacacggccaggcagccaagcacgagctgatcaccgcggcactgctc
gacctcgactcgtcctacctcgcggtgcacggtccacccggcacgggcaagacattcacg
tctgcggccgtgatcgcacggctggtcaatcgacaccattggcgcatcggcgtggtcgca
caggcacatgccgtggtggagaaccttttccgcgacgtcatcgccgcggacgtgccggcc
gacgccgtggccaagaagccccatggtgacaacgcgtgctggaccgaactgagcgagaag
gaatatcccgacttcctcgatcagcacaccggcaccggctgcgtgatcggcggcaccgca
tgggatttcgcgaacccggtacgcatcccgcccggcagtctggatctgctggtggtcgag
gaggccggccagtacagcctggccaacaccatcgcggtcgcccccgcggcgcacaacctg
ctgctgctgggcgacccgcagcagctcccccaggtcagccagggcacacatcccgaaccc
gtcgacacctcggcgctgggctggctcgtggacggccaccacacgctgcccgccgaactc
ggctacttcctggactgctcgtaccgcatgcaccccgcggtgtgcgcggcggtgtcgcgg
ctgtcctacgacaaccgcctgcgctcggtcgacgacgtcaccgcggcgcgccacctcgac
ggccaggaacccggcgtgcacgtactgctggtcgaccacgacggcaacgccaccgacagc
ccggaggaggcccaggtgatcgtcgccgagatccggcgactgctcggcgcggcctggacc
gacgagcgcggcaccgtgccgctgggccaggaccacgtgctggtggtgacgccgtacaac
gcacaggtggtgacgatgcgccggtatctcgacgcggccggtctcaccgacgtgcgtgtg
ggcacggtggacaagttccagggccagcaggcgcccgtggtgttcatctcgatggtggcg
tcctcggtcgacgatgtgccgcgcggaatctcattcctgctcaaccgcaaccgcctcaac
gtcgcggtgagccgcgccaagtacgccgcggtgatcgtgcggtcggccgcgctcaccgaa
tacctgccctcgaccccggccggtgtcgtggaactcggcgcgttcttggccctacccgac
gccctacccgacgccctgaacaccgtgtga
DBGET
integrated database retrieval system
