Mycolicibacterium smegmatis INHR2: LI98_30650
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Entry
LI98_30650 CDS
T03432
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
msh
Mycolicibacterium smegmatis INHR2
Pathway
msh00300
Lysine biosynthesis
msh00470
D-Amino acid metabolism
msh01100
Metabolic pathways
msh01110
Biosynthesis of secondary metabolites
msh01120
Microbial metabolism in diverse environments
msh01230
Biosynthesis of amino acids
Module
msh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LI98_30650
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LI98_30650
Enzymes [BR:
msh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LI98_30650
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AIU24439
UniProt:
A0A8B4QMT3
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All DBs
Position
complement(6263547..6264926)
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AA seq
459 aa
AA seq
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MTDAPPRAGAPLPSPEELLYRREQIVADVVRQGFIDDLHPLCGVIDLDTLDELMASLHAA
YPADLPALHTIAAKAISLRPVLARFAAAGFGCEVASPGELELALAAGFPAERIVFDSPAK
TPTEIARALELGVSFNVDNFEELARIDAAVARNGRPRSVIGVRVNPQTGAGTIDAMSTAT
STSKFGIGLADHRDEIIDAFATRPWLTQLHVHSGSQGMSLEHAAEGVRLTTDLAADIDAR
AGSRQIQRIDVGGGLPVNFRSDDVTPTFADHRAALQAAAPRLFDGTYTVVTEFGRALTAK
AGTVVARVEYTKVTGGRPIAITHAGVQVATRSIFAPEAWPLRVEVYDAHGRRRDDPPRVQ
DVAGPACFTGDMLAVGRELPPVHAGDLVAVPDTGGYYFSTHFSYNALPRPAVYTVGTDQH
GDRRWSLARRAQTIEQIVAEAGEPSLEPLTFRPPNRPSD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacgcaccaccgcgggccggcgcaccactgccgagcccggaggagctcctgtac
cggcgcgaacagatcgtcgccgacgtggtccggcaggggttcatcgacgatctgcacccg
ctgtgcggggtcatcgacctcgacaccctcgacgaactcatggcgtcgctgcacgcggcg
tacccggccgatctgccggctctgcacacgatcgcggccaaggcgatatcgctgcggccg
gttctcgcgcggttcgccgcggcggggttcggatgcgaggtggccagccccggcgagctc
gaactcgcactcgcggccgggtttccggccgagcgcatcgtgttcgactcgccggccaag
accccgaccgagatcgccagggcgctcgagttgggggtgtcgttcaacgtcgacaacttc
gaggaactcgcgcggatcgacgcggccgtcgctcgcaacggcaggccccggtcggtgatc
ggggtgcgggtgaatccccagaccggtgccggaaccatcgacgcgatgagtacggccacc
tcgacgtcgaagttcggcatcgggttggccgaccaccgtgacgagatcatcgacgccttc
gcaacccggccctggctgacgcagctgcacgtccacagcggctcacaggggatgagcctg
gagcacgcggccgaaggcgtgcggctcacgacagacctggccgccgacatcgacgcacgg
gccggatcgcggcagatccagcggatcgacgtcggtggcggactgccggtgaacttccga
tccgacgacgtcacaccgactttcgccgaccaccgggcggcgctgcaggccgctgccccg
cgtctgttcgacgggacctacaccgtggtgaccgaattcggccgggcgctgaccgccaag
gccggcaccgtcgtcgcccgcgtcgagtacacgaaggtgacgggcgggcgtccgatcgcc
atcacccacgccggtgtgcaggtggccacccgctcgatcttcgcgcccgaggcctggcca
ctgcgggtcgaggtgtacgacgcgcacgggcggcgccgcgacgacccgcctcgggtgcag
gacgtggcgggccccgcctgcttcaccggggacatgctcgccgtcggacgggaactgccg
ccggtccacgcaggtgacctggtcgccgtccccgacaccggcggctattacttctcgacg
cacttctcctacaacgcattacccagacccgccgtctacaccgtgggaaccgaccagcac
ggtgaccgacggtggtcactggcccgccgggcccagacgatcgagcagatcgtcgcagag
gcaggtgaaccatcactcgaaccactgacgtttcgcccgcccaaccgcccctccgactga
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