Mycolicibacterium smegmatis INHR2: LI98_31030
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Entry
LI98_31030 CDS
T03432
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msh
Mycolicibacterium smegmatis INHR2
Pathway
msh03030
DNA replication
msh03430
Mismatch repair
msh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LI98_31030
03430 Mismatch repair
LI98_31030
03440 Homologous recombination
LI98_31030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msh03032
]
LI98_31030
03400 DNA repair and recombination proteins [BR:
msh03400
]
LI98_31030
Enzymes [BR:
msh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LI98_31030
DNA replication proteins [BR:
msh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LI98_31030
DNA repair and recombination proteins [BR:
msh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LI98_31030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AIU24513
LinkDB
All DBs
Position
complement(6340489..6341502)
Genome browser
AA seq
337 aa
AA seq
DB search
MSRAPLSSTPQLWGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMS
SLLNPGVDPGPTHVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFLAAEA
ELVGAELPIDTAMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILK
PTLARARDRKVWLPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLV
QGMRVALSAEVVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGV
PLVRDDEFMRLLDHVVGGADVETFVDTTADGDQYALF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgagcaccgctgtcgagcaccccgcagttgtgggggcggccggcggatgagccg
ggctcgggctgggcggtcgtcgatgtcgagaccacgggcttccggcccggtcaggcgcgc
atcgtgagcgtggccgcgctggcggtcggtgacgacggcagtgtcgagcacagcatgtcc
agtctgctcaaccctggtgtcgatccggggccgacgcacgtacatgggctcaccgccgag
atgctggagggccagccgtgcttcgccgacgtcgtcgacgagctgatcgaggtgctgcgc
ggacgcaccctggtcgcccacaacgcggggttcgactacagcttcctggccgccgaggcc
gaactggtgggcgccgaacttcccatcgacaccgcgatgtgcacggtcgagctggcacgc
aggctcgagctcggtaccgagaacctgcgtctggagacgctggccgcgcactggggcgtc
acgcagatgaagccgcatgacgcgctcgacgacgcgctggtgctcgcgcagatcctcaaa
cccacgctggcacgcgcccgcgatcgcaaggtgtggctgccgctgcgtcagctgacgcgc
aagcgctggcccaacgggcatgtgacacacgacgaattgcgtccgctcaaggtcgaggcg
tcgcgtctgccgtgccgttacgccaacccgggtccgttcgtcgcgggccgcccgctggtg
caggggatgcgggtggcgctgtcggccgaggtggtgcgcacacacgaggaactgctcgag
cgcgtcctgcacgccggccttgcctacagcgacatggtggatctgcagacgtcgctggtg
atctgcaacgacccggcgcccgagcagggcaagggctaccaggccaaggaactcggcgta
ccgctggtgcgtgacgacgagttcatgcgtctgctcgaccatgtggtcggtggtgccgac
gtcgagacgttcgtcgacaccaccgccgacggtgaccagtacgcgctgttctga
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