Marinobacter shengliensis: MAALD49_02240
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Entry
MAALD49_02240 CDS
T09258
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mshe
Marinobacter shengliensis
Pathway
mshe03030
DNA replication
mshe03430
Mismatch repair
mshe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mshe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MAALD49_02240
03430 Mismatch repair
MAALD49_02240
03440 Homologous recombination
MAALD49_02240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mshe03032
]
MAALD49_02240
03400 DNA repair and recombination proteins [BR:
mshe03400
]
MAALD49_02240
Enzymes [BR:
mshe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MAALD49_02240
DNA replication proteins [BR:
mshe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MAALD49_02240
DNA repair and recombination proteins [BR:
mshe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MAALD49_02240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BEH12856
LinkDB
All DBs
Position
complement(258739..259461)
Genome browser
AA seq
240 aa
AA seq
DB search
MSDSIKSGNRKQDWPDNYRKAAEKAKDSRIRAFYQAGCPDPQTPIKEVPLVALDFETTGL
DADRHSIISVGLVPFTLGGIQLGKAWHQIVRPQLPLQQDTVTIHGITHSEIEHAPDLADV
LDTLFQHLNGRIPVVHYRNIERPFLNTALQWRLKEQLRFPVIDTMAIEAHLHPNRNPSRW
QQLMGKQPISIRLADSRTRYGLPHYAGHNALIDAIATAELFQAQVQHHFSSDTPIGDLWV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcatcaaaagcggaaaccgaaaacaggactggccagacaactaccgaaaa
gccgcggagaaagcgaaggattcccgaatccgagctttctaccaggccggctgtcctgac
ccgcaaactcccattaaagaggtgcccctggtcgccctcgacttcgaaaccaccgggctg
gatgccgaccgccattccattatcagcgttggcctggtcccctttaccctcggtggcatt
caactcggcaaagcctggcaccagatcgtccggccgcaactgccgttgcagcaagacacc
gtcaccatccacggcatcacccacagtgaaatcgaacacgccccggacctcgccgacgtg
ctcgacaccctgttccagcacctcaacggccgaatccccgtggtccactaccgcaacata
gagcgcccgtttctcaacaccgccctgcaatggcgcctgaaagaacaactccgcttcccg
gtcatagacaccatggccatcgaagcccacctgcaccccaaccgaaacccaagccgctgg
caacaactcatgggcaaacaacccatctccatccgcctggccgacagccgaacccgctac
ggcttaccccactacgccggccacaacgccctgatagacgccatcgccaccgccgaactg
ttccaggcccaggtgcagcatcatttcagttctgacacacctatcggagatctctgggtc
tga
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