Marinobacter shengliensis: MAALD49_09180
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Entry
MAALD49_09180 CDS
T09258
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mshe
Marinobacter shengliensis
Pathway
mshe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mshe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAALD49_09180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mshe03019
]
MAALD49_09180
03009 Ribosome biogenesis [BR:
mshe03009
]
MAALD49_09180
Enzymes [BR:
mshe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MAALD49_09180
Messenger RNA biogenesis [BR:
mshe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MAALD49_09180
Ribosome biogenesis [BR:
mshe03009
]
Prokaryotic type
rRNA helicases
MAALD49_09180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
AAA_19
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BEH13550
LinkDB
All DBs
Position
complement(1016049..1017572)
Genome browser
AA seq
507 aa
AA seq
DB search
MSELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFAL
PLLSRIDASVAEPQILVLAPTRELAIQVAEAFTTYASKFKHFHVLPIYGGQDFAPQIRGL
KRGAQVIVGTPGRMLDHLRKGTLKLGSLKALVLDEADEMLRMGFIDDVEAILAKTPDTCQ
RALFSATMPPQIKKVAQTYLKNATEVKIESETRTVERISQFVLPVYAERKLDALTRILEV
EPFDASIIFVRTKAETTLLAEKLSARGHAVAPLSGDLNQRQREQTVEDLKRGKKDIIIAT
DVAARGLDVPRITHVINYDVPYDTEAYIHRVGRTGRAGRTGKAILLVTPRERSWLRTLER
ATNSPMEPYQLPSPAALQKMRVEQFEEQLLGFTNDPRSAKAIALLDDIAERNDMDMAAVA
GALACLLEASQPDSLPLEQPEALPEVSAAPRRDRKGPPPGKGGFRKGAPGKKFSKDGKPG
FRKGPPKGKPAGKGGKPSANGPKRAPR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattgtcttttgccgaactggggctggatccagcagtactggaagccgtctcc
gcagttggctatgaaaccccgtcgcccatccaggcgcaatccattccagccctgctggcc
ggcaaccacctactgggcgttgcccagaccggtactggcaaaacggcggcgtttgcactg
ccgctgctgagccgtattgatgccagcgttgcagagccccagattctggtgcttgctcct
acccgggagctggccattcaggtggccgaggcgttcaccacctacgccagcaagttcaaa
cacttccacgttctgcccatttacggcggccaggactttgcgccacagatccgcggcctg
aagcgtggcgcccaggtcatcgtgggtacgccaggccggatgctggaccacctgcgcaaa
ggcaccctgaaactgggtagcctgaaggcactggtgctggatgaagcagacgaaatgctg
cgcatgggctttatcgacgacgtagaagcgattctggcgaagacaccggacacctgtcag
cgcgccctgttctcggccaccatgccgccgcagatcaagaaggttgcgcaaacctatctc
aagaatgcgacagaagtaaaaatcgagagcgaaacccgcacggttgagcgtatctcgcaa
ttcgtattaccggtctacgccgagcgcaaactggatgccctgacccgcatcctggaagtg
gagccgttcgacgcctccattatctttgtacgcaccaaggcagaaaccaccctgctggct
gaaaaactgtcagcccgtggccatgcggttgcgcccctgagtggtgacctcaaccagcgc
cagcgtgaacagaccgtagaagacctcaagcgcggcaagaaagacatcatcatcgccact
gacgttgctgcccgtggcctggacgtaccccggattacccacgtgatcaactacgacgtg
ccctacgacaccgaggcgtacatccaccgggttggccgcaccggccgtgcgggccgcacc
ggcaaggcgattttgctggtcacaccgcgcgagcgcagctggctgcgcaccctggagcgg
gccaccaactctccgatggaaccgtaccagctgccgtcaccggctgcgctgcagaaaatg
cgagtagagcagtttgaagagcaactgctgggcttcaccaacgatccccgatctgccaag
gccattgccctgctggacgacattgccgagcgcaatgacatggacatggcggccgttgct
ggcgccctggcctgcttgcttgaagcctcccagccggattcactgccgctggagcagccc
gaagccctgccggaagtgtccgcagcgccccgtcgcgaccgcaaaggcccgcctcccggc
aaaggtggcttccgtaaaggcgctcctggcaagaaattcagcaaagatggcaagcccggc
ttccgcaagggcccacccaagggcaagcctgctggcaagggcggcaagccctctgccaat
ggccctaagcgcgccccgcgctga
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