Marinobacter shengliensis: MAALD49_15480
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Entry
MAALD49_15480 CDS
T09258
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mshe
Marinobacter shengliensis
Pathway
mshe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mshe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAALD49_15480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mshe03019
]
MAALD49_15480
03009 Ribosome biogenesis [BR:
mshe03009
]
MAALD49_15480
Enzymes [BR:
mshe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MAALD49_15480
Messenger RNA biogenesis [BR:
mshe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MAALD49_15480
Ribosome biogenesis [BR:
mshe03009
]
Prokaryotic type
rRNA processing factors
MAALD49_15480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BEH14180
LinkDB
All DBs
Position
complement(1707591..1710719)
Genome browser
AA seq
1042 aa
AA seq
DB search
MKRMLINATHPEELRVALVDGQRLFDLDIESSTREQKKANIYKGRITRVEPSLEAAFVDF
GAERHGFLPLKEISKEYFKKSPGQIEGKINIKDVLSEGQEVIVQVDKEERGNKGAALTTF
ISLAGRYLVLMPNNPRAGGISRRIEGDDRSQLKDAMNGVQVPKSMGIIVRTAGIGRTTEE
LQWDLDYLVQFWEAITQAAGERKAPFLIHQESNVIIRAVRDYLRQDIGEVLIDADGVYED
VLSFVRAVMPTFENKIKLYKDEIPLFSRYQIEGQIETAFQREVKLPSGGSIVIDPTEALV
SIDINSSRATKGHDIEETALQTNLEAAEEIARQLRLRDMGGLIVIDFIDMTPAKHQREVE
QKMREALEIDRARVQVGKISRFGLLEMSRQRLRPSLGETRSEVCPRCEGQGTIRGIESLA
LSIMRLIYEESSKEKTAEVRAIVPVSVATFLLNEKRKQLADIEARQGVSVVVAPVPNMET
PHFEIIRLRQDEATPEHIASHQVAQEYNEREEESAEVQTTEKPVREQAAVKAIRPTAPAP
TAPQAAAEPAEPEEGLFRKLGKKIACFFRGEQEQTDTKQAAGNRDRAGDRRNQGRQDRRK
SRVARDDQRQGGNRTGNDRRQSGQPNRADDNRNRNRGNRNDDQSRGAQNRSGQQDKAGDN
RGADTKGSENRRDNRKDSQGRNQNRNRPQRDAKDQKDNREPQQDAQKAPAENKQGGDDKR
RKPRRQRNRDGSPAESPASTPAARKAERSERHQKDTQPEKGVETDNEEAKQQPAQQPVEQ
PKKVEAPKSAAAEDKATVETPKADKQEQPKADKVPEEKAEQPAQPAEQGNQADGQKASET
TDAKADAAKPADAPESGNAEKDKEPREPRKARPANRQRKPKAADKAADSANAEAPATKTD
SEAKAAEPTDKPEATPKPESKPAEATEASKTESKAANSETANAPKAEKAEQAETAEKPGG
EEPKAQPESPEAEAKADQAEPEAESKTDAEPKAEAKADDAQNAPAQDEMPDVPVTPGRAY
NDPREVRKRQRAAAEAKKAGSN
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctgatcaatgcaactcaccctgaagagttgcgcgtagctctggtagac
ggccaacggctttttgacctggatatcgaatccagcacccgcgaacagaaaaaagccaac
atttacaaaggccggatcacccgtgtagaacccagccttgaagcggcgttcgtcgacttt
ggcgcagagcgtcatggcttcctcccgctgaaggaaatctccaaagagtacttcaagaag
tctcccggccagatcgaaggcaagatcaacatcaaggacgtcctgtctgaagggcaggaa
gtcatcgtacaagttgataaagaagagcgtggcaacaagggcgcagccctgaccaccttt
atctctctggccggccgttacctggtgctgatgcccaacaacccacgcgccggcggcatc
tcccgccgtattgagggtgatgaccgttcccaactgaaagatgccatgaacggcgtacaa
gtgcctaaatccatgggaatcatcgtacgcaccgctggaattggccgtaccaccgaagag
ctccagtgggaccttgattacctggtgcagttctgggaagccattacccaggcggctggc
gagcgcaaggcgccattcctgattcaccaggaaagcaacgttatcatccgggcggttcgt
gactacctccgccaggacatcggcgaagtcctgatcgacgccgacggcgtttatgaagat
gtactcagctttgtacgcgccgtgatgcccaccttcgagaacaagatcaagctgtacaag
gatgagatccctctgttcagccgctatcagatcgaaggccagatcgaaaccgcgttccag
agggaagtgaagctgccctccggcggctccatcgtgatcgaccccactgaagcactggtc
tccattgatatcaactcctcccgggccaccaaaggtcacgatatcgaggaaactgccctg
cagaccaacctggaagcggcagaagaaatcgctcgccagctgcgcctgcgggacatgggc
gggttgatcgttatcgatttcatcgacatgacacccgccaagcaccagcgcgaagtcgag
cagaaaatgcgtgaagccctggaaatcgaccgggcccgcgttcaggtcggcaagatttcc
cgcttcggcctgctggagatgtcacgtcagcgcctgcgcccatcactgggtgaaacccgc
agcgaagtgtgcccgcgctgtgaaggccagggcactatccggggtattgaatccctggcc
ctgagcatcatgcgactgatctacgaagagtcgtccaaggaaaagactgccgaagtccgc
gccatcgtgccggtgtccgtggctaccttcctgctgaacgaaaaacgcaagcagttggcc
gacatcgaggcacgccagggcgtttccgtggtggttgctccggtgccaaatatggaaaca
ccgcacttcgagatcatccgtctgcgtcaggatgaagcaacccctgagcacattgccagc
catcaggttgctcaggaatacaacgagcgggaagaagaaagcgccgaagtacagaccacc
gaaaagccggttcgtgagcaggctgccgtgaaggccatccgccccacagcccctgccccg
acagcaccccaggccgccgctgaacctgcggagccagaagaaggcctgttccgcaagctc
ggcaagaaaattgcctgtttcttccgcggtgagcaggagcaaaccgacaccaaacaagcc
gccggtaaccgtgaccgcgccggagaccgtcgtaaccagggccgccaggaccgccgcaaa
tcacgggtagcccgtgacgaccagcgccagggtggcaatcgcaccggaaacgaccgccgc
cagagtggccagccaaaccgcgctgatgataaccgcaaccgtaatcgcggcaaccgcaac
gatgaccagtcccgcggtgcccagaatcgttcagggcagcaggacaaggccggcgataac
cgcggcgcggacacaaaaggcagtgagaaccgtcgggacaaccgcaaggactcacagggt
cgcaaccagaaccgcaatcgtccgcagcgcgatgcgaaagaccagaaagacaatcgcgaa
ccgcaacaagatgcccagaaggcgccggccgagaacaagcagggtggtgacgacaaacgt
cgcaagccacgccgccagcgtaatcgcgacggctcacctgccgagtctccggccagcaca
ccggccgctcgcaaggcagaacgcagcgaaaggcaccagaaggatactcagcccgagaaa
ggcgtagagaccgataacgaagaggcgaagcaacagccagcccagcaaccggttgaacag
cccaagaaggttgaagcaccgaagagcgctgccgccgaagacaaggccacggtggagaca
cccaaggctgacaagcaggaacaaccgaaagccgacaaggtgccggaagagaaagccgag
caacctgcccagccggcagagcaaggcaaccaggctgatggccagaaggcgagcgaaaca
accgacgcaaaggctgacgccgcgaagccggctgacgcgcctgaatccggtaacgccgag
aaggacaaggagcccagggaaccccgcaaggctcgcccggcaaaccgtcagcgcaaaccg
aaagccgcagacaaggctgcagatagcgctaatgctgaagcgccggccaccaagaccgac
agcgaagcaaaagcagcagagccaactgacaagccggaagcaacgccgaagcccgagagc
aagcctgctgaagcgacggaagcttcaaagaccgaaagcaaggcagcaaacagcgaaacg
gcgaatgccccgaaggctgaaaaggcagagcaagctgaaactgccgaaaagcccgggggt
gaagaaccaaaagctcagccagagagcccagaggccgaggccaaggctgaccaggcagaa
cctgaagctgagtctaagactgacgcagaacccaaggcagaagcaaaagccgacgatgcg
cagaacgcccccgcacaggacgaaatgccagacgttccggtcactccgggccgtgcatac
aatgacccacgtgaggtccgtaagcgccagcgtgcggccgccgaagccaagaaggccggg
agtaactga
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