Marinobacter shengliensis: MAALD49_17070
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Entry
MAALD49_17070 CDS
T09258
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mshe
Marinobacter shengliensis
Pathway
mshe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mshe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAALD49_17070 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mshe03019
]
MAALD49_17070 (rhlB)
Enzymes [BR:
mshe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MAALD49_17070 (rhlB)
Messenger RNA biogenesis [BR:
mshe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MAALD49_17070 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Utp25_C
AAA_22
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
BEH14339
LinkDB
All DBs
Position
1876930..1878213
Genome browser
AA seq
427 aa
AA seq
DB search
MTADPKPTGDLRFSDLNLDKRLLDAISKIGFEYCTPIQAETLPWTLACEDLIGQAQTGTG
KTAAFLITAIQTLLETPVDEKDRFASEPRVLALAPTRELAMQIAKDAEQLCQYTGHNVVT
VVGGMNYDKQREQLQNEIVDILVATPGRLIDFLGSQDVFLDQIDILILDEADRMLDMGFI
PDVKRIIRKCTSKEDRQTLLFSATFNQDVLNLASMWTQNAEFVEIEPEQKTAERVEQTVY
LVSDDDKLPVLVNYLKRPEVEKAIVFANRRDQCRDLEEDLKNQGVKVSLMSGEIAQNKRL
KTLDQFKKGQIQVLVATDVAGRGIHVNGVTHVFNYNLPENAEDYVHRIGRTGRAGKTGVS
VSFAGEDDSFALPEIEKYISQKLKTAVPDEDLMATMDNPPITRKRGGRRPQSGRGPAGRG
GSRPRRN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgacccaaaacctaccggcgatttacgcttcagcgatcttaacctggacaag
cgtctgctggatgccatcagtaaaatcggatttgaatactgcacgcccattcaggccgaa
accctgccctggaccctggcttgcgaagacctgatcggccaggcccagaccggtaccggt
aaaacggcagccttcctgattacggcgatacagactctgctggaaacaccggtggatgaa
aaagaccggtttgcctctgagcccagagtgcttgccctggctccaacccgtgaattggcg
atgcagattgccaaggacgcagagcaactgtgccagtacaccggccacaatgtggttacc
gtcgtgggcggtatgaactacgacaagcaacgcgagcagttgcagaacgagattgtcgac
attctggtggcaaccccgggccggttgatcgactttttgggctcccaggacgtgtttctg
gaccagatcgacatcctgatcctggatgaagcagaccgcatgctggatatgggcttcatc
cctgacgtcaaacgaattatccgcaagtgcaccagcaaagaagatcgccaaaccctgctg
ttcagcgccaccttcaaccaggacgttctgaacctggcgtccatgtggacccaaaatgca
gagtttgtggagatcgagccggagcagaaaaccgccgaacgggtagaacagaccgtgtat
cttgtgtctgacgacgacaagctgccggtgctggtgaactacctcaaacgtccggaggtt
gagaaggccattgtgtttgccaatcgtcgtgaccagtgccgggatcttgaggaggatctg
aagaatcagggcgtgaaggtgtccctgatgtctggtgagatcgcccagaacaaacggttg
aaaaccctggaccagttcaaaaaggggcagatccaggtgctggtggctaccgatgtggca
ggccggggcattcacgtgaatggcgttacccacgtgttcaactacaacctgcctgagaac
gccgaggattacgtacaccggattggtcgtaccgggcgcgcaggcaagaccggtgtttcc
gtcagctttgccggggaagacgactcttttgccttaccggagatcgagaagtacatcagc
cagaagctgaaaaccgcggtgccagacgaagacttgatggccaccatggataacccgccg
atcacgcgcaagcgcggtggtcgccgcccccagagcggccgcgggccggcagggcgcggc
ggttcgcggccccggcgcaactga
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