Marinobacter shengliensis: MAALD49_21900
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Entry
MAALD49_21900 CDS
T09258
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mshe
Marinobacter shengliensis
Brite
KEGG Orthology (KO) [BR:
mshe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mshe03032
]
MAALD49_21900 (topA)
03400 DNA repair and recombination proteins [BR:
mshe03400
]
MAALD49_21900 (topA)
Enzymes [BR:
mshe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MAALD49_21900 (topA)
DNA replication proteins [BR:
mshe03032
]
Prokaryotic type
DNA Topoisomerases
MAALD49_21900 (topA)
DNA repair and recombination proteins [BR:
mshe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MAALD49_21900 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Zn_Ribbon_TF
Toprim_4
DUF2399
Motif
Other DBs
NCBI-ProteinID:
BEH14822
LinkDB
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Position
complement(2406781..2409420)
Genome browser
AA seq
879 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSDFIVKSSVGHIRDLPVSGSGSQSDPKERAKQAAATRK
MSPEEKAEHKKRKSREQLVARMGVNPDDDWSARYEILPGKEKVVSELKRLAKSADHIYLA
TDLDREGEAIAWHLQETIGGEPEKYRRVVFNEITKRAIQEAFKDPGNLDNNRVNAQQARR
FLDRVVGYMVSPLLWAKIARGLSAGRVQSVAVRLIVEREREIRKFVPEEFWQLHADLTAD
GSADPVRFEVTRYNDKPYRPVNEAQSKEHVDRLKSGGFRVSKREDKPTRSRPSAPFITST
LQQAASNRMGFSVKKTMMLAQRLYEAGFITYMRTDSTNLSQDAVTGCREFIQKQFGDRYL
PDSPRLYGSKEGAQEAHEAIRPTDVSRRPTDISGLEKDAEKLYDLIWRQFIACQMADAEF
LSTSIVVANGDYELRTRGRIVKFDGFLKAAPQSAKKDEDVALPDIKVDQSLDLKKLDPTQ
HFTKPSPRYTEASLVKELEKQGIGRPSTYASIISTIQDRGYVRLQNRRFYAEKMGEIVTE
RLAESFPNLMDYDFTARLEGELDEIAEGDVQWKKVLNDFYAKFRNQLESAEKSDGGMRAN
TPTETDISCPSCGRNMQIRVASTGVFLGCSGYSLPPKERCKTTINLVSGDEVVSADEDVE
GEGETRLLRKKRRCPKCGTAMDSYLIDEKRKLHVCGNNPDCSGYEVEEGSFRIKGYDGLT
LECDKCGSEMQLKTGRFGKYFGCTNTECKNTRKLLKNGEPAPPKMDPVPMPELQCQKVDD
TYVLRDGASGLFLAASKFPKNRETRPPLVMEIKPHRKEIDPKYDYLMDAPEKDPEGNPTV
IRYSRKSKEQYVMSEQDGKATGWSAWYENGRWVPRDKKK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagtctcgttattgtcgagtcaccagcgaaagcgaagaccatcaacaagtac
ctgggctcggattttatcgttaagtccagtgttggccacattcgtgacctgcctgtcagt
ggtagtggcagccagtcagacccgaaagaacgggcaaagcaggccgccgccacccgcaag
atgagcccggaagaaaaagccgagcacaagaagcgtaagtcacgggagcagctggttgcc
cgcatgggcgtaaaccctgatgacgactggagcgcccgctacgagatactgcccggcaag
gaaaaagttgtcagcgagctcaagcgattggccaaatccgccgaccacatctacctcgca
acggatttggatagagaaggggaggccattgcctggcaccttcaggagaccattggtggc
gaaccggaaaagtatcgccgggtggtgttcaatgaaattaccaagcgagccattcaggaa
gcgttcaaagaccctggaaacctcgataacaaccgtgtaaatgcccagcaggcgcgccgg
tttctggatcgtgtcgtgggttatatggtgtctccgctgttgtgggcaaagattgcccgg
ggtctgtctgccggccgggtgcagtctgttgccgttcggttgattgttgagcgggagcgg
gaaatccggaaattcgtaccggaagagttctggcagctgcatgcggatctgaccgcagat
ggttccgcagacccagtgcggttcgaggttacgcgttacaatgacaaaccctatcgcccg
gtaaacgaggctcagagcaaagagcacgtcgatcgcctgaaatccggcggcttcagggtt
tcaaagcgggaagacaagccgacacgctcacgcccgtcggcgccgtttattacatccacg
ctccagcaggcggcgagcaatcgcatgggcttcagtgtcaagaaaaccatgatgctggcc
cagcgcctttatgaagccggttttatcacctatatgcgtactgactccaccaacctgagt
caggatgcggtaacgggctgccgtgaatttatccagaagcagttcggagatcgctatttg
ccggacagcccccgtttgtatggcagcaaggaaggcgctcaggaggcccacgaagcgatt
cgtcctactgacgtatcccgcaggcctacggatataagcggcctggaaaaagacgctgag
aagctttatgacctgatctggcgtcagtttattgcttgccagatggcggatgccgagttc
ctgagtacgtccattgtggtcgccaatggcgattatgagctccgaacccgtggtcgtatc
gtcaagtttgacggcttcctgaaagctgcgccccagtctgccaagaaagatgaagatgtg
gctctgcccgatattaaggtggaccagtcgctggatctgaaaaagctggacccaacccag
cacttcaccaagccctcaccaaggtataccgaagccagcctggttaaagagctggagaag
cagggtattggccggccttccacctatgcttcgatcatctctaccatccaggaccgtggc
tacgttcggcttcagaatcgccgtttctatgccgagaaaatgggtgaaattgttaccgaa
cggctggcagagtccttcccgaacctgatggattacgattttacggctcgtcttgaaggt
gagctggacgaaatcgcagagggtgatgttcagtggaagaaagtgctgaacgatttctac
gccaagttccgcaatcagctcgaaagcgctgagaagtctgatggcggcatgcgtgccaac
accccgacagagacagacatatcctgcccgagctgcggccgtaatatgcagattcgcgtg
gccagcaccggtgtgttccttggctgttccggttactcattgccgcccaaggagcgttgc
aagacgaccatcaatctggtctctggcgacgaagtggtcagtgctgatgaggatgtggaa
ggcgagggcgaaacccgcttgctgcgcaagaagcgccggtgcccgaagtgtggtactgcc
atggacagctacctgattgatgagaaacgcaagctgcacgtttgcggtaataatccggat
tgttctggctatgaagtcgaagagggcagtttccgcatcaagggttatgacgggctgaca
ctcgagtgcgataagtgtggctcggaaatgcagctgaaaaccggtcgatttggcaagtat
ttcggttgcaccaataccgagtgcaagaacactcgcaaattactcaagaacggcgagccg
gccccgcccaaaatggacccggtacccatgccggagcttcagtgccagaaagtggatgac
acttatgtgctccgtgatggtgcttccggcctgttcctggctgccagcaagttcccgaaa
aaccgggaaacccgcccaccgctggtgatggaaatcaagccacaccggaaggaaatcgat
ccgaaatacgattacctgatggacgccccggagaaggatcccgagggtaacccgacggtg
atccgttatagccggaagtccaaagagcagtacgtgatgtcggaacaggatggcaaagcc
accggttggtccgcctggtacgaaaacggccgctgggtgcccagggacaagaagaagtga
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