Marinobacter shengliensis: MAALD49_24080
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Entry
MAALD49_24080 CDS
T09258
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mshe
Marinobacter shengliensis
Pathway
mshe03030
DNA replication
mshe03430
Mismatch repair
mshe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mshe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MAALD49_24080 (dnaE)
03430 Mismatch repair
MAALD49_24080 (dnaE)
03440 Homologous recombination
MAALD49_24080 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mshe03032
]
MAALD49_24080 (dnaE)
03400 DNA repair and recombination proteins [BR:
mshe03400
]
MAALD49_24080 (dnaE)
Enzymes [BR:
mshe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MAALD49_24080 (dnaE)
DNA replication proteins [BR:
mshe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MAALD49_24080 (dnaE)
DNA repair and recombination proteins [BR:
mshe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MAALD49_24080 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
BEH15040
LinkDB
All DBs
Position
complement(2643257..2646739)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAQTFVHLRVHSEYSMVDGLVRVKPLISRVAELGMPAVGLTEQSNMCSLVRFYKAAMGAG
VKPIIGADLWLENPDEPENPFRLTLLARDEKGYLHLTEIISLGYTEGQRYGKPIIRKAWL
EARAAGLIALSGAKMGDVGKALLAGKPELARERAQYWKNLYPGSYYLELQRTERAGDEDC
LHLSVELAAELGLPVVATNDVHFLTADDFEAHEARVCIGESRTLDDPRRDRRFSDQQYLR
SAEEMIELFSDIPEAVENTVEIARRCSVKVRMGEYFLPNYPIPDGMTMDEYFRHVSEEGL
EMRLETILSKDDPEYDQKREEYYKRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYALLITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIEYTA
EKYGREAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKLIPFEVGMTLNKAIEQEP
QLKEFLEQDEEAQEIWEMALKLEGVCRNAGKHAGGVVIAPTKITDFSPLYCDDEGGSLVT
QFDKGDVEDAGLVKFDFLGLRTLTIIKWALHMINPRRQAQGQSELDIATIPLEDKRSFEL
LKKAETTAVFQLESRGMKDLIRRLQPDSLEDMIALVALFRPGPLQSGMVDDFIDRKHGRQ
PLSYPHPDYQYEGLKPVLEPTYGVILYQEQVMQIAQVMAGYTLGNADMLRRAMGKKKPEE
MAKQKAFFLEGCANNGIDETLAENIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYP
AEFMAAVLTADMQNTDKVVTLVEECRNMKLDLLVPDVSRSAYTFTVNDDGQIVYGLGAIK
GLGEGPIDSIVEAAKDGPFQDIFDFCRRVDLKKVNKRAMEALIRAGAMDKLGAGRAQLMA
SIDKAVQQADQQSRNDAAGMMDMFGEMLESSGEGEDPYADVAHVREWPEKERLKGEKDTL
GIYLTGHPFDEYEREVRRFVRNSIADLKPNKSPQRVAGLVVAQRTMKTRTGSTMCFITLD
DRSARIEATLFSEAFFENRELLQSDQVIVVEGQVSHDDYSGQMKMRVSSVMDVATARQQF
SRGIRLALHAEQLQNGLLDKLDDTLRPFRNEGSPVWIEYSSAEARTRIELGESWRVQPDD
NLLFELRHLVGEKSVELVYD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcacagacgttcgtacatcttcgcgtacactccgaatactccatggtggatggcctg
gtaagggtcaagccactgattagccgtgtggccgagttgggcatgccggcggtgggcctc
accgaacaatccaatatgtgctcgctggtgcgcttttataaggcggccatgggtgctggt
gtgaagccgattatcggtgccgatctttggctggaaaatcctgatgagccggaaaacccg
ttccggctcacgttgctggcgcgggatgagaaaggctatctgcaccttaccgaaatcatt
tccctgggctacaccgagggccagcgctacggcaagccgattatccggaaggcctggctg
gaagcccgtgcggcgggtctgattgcgctttccggcgccaaaatgggcgatgtgggcaag
gccctgctggcgggcaagccggaactggcccgggaacgggctcaatactggaagaatctg
tatccgggcagctactacctggagctgcagcgtaccgagcgggcaggtgatgaggattgc
ctgcacctgagcgtcgagctggcggctgaattgggcctgccggtggttgccaccaacgat
gtgcacttcctgacggcggacgatttcgaagcccacgaggcccgagtctgtatcggtgag
agccgaacactggatgacccccgtcgggaccggcgattcagcgaccagcagtatcttcgc
agcgcggaagagatgatcgaactgttttcggacatccccgaggccgttgaaaacacggtc
gagattgcccgccgctgttcggtcaaggtccggatgggcgaatacttcctgccgaactac
ccgattcccgatggcatgaccatggacgagtatttccggcatgtgtccgaggaaggtctg
gagatgcgcctggaaaccatcctgagcaaggatgatccggagtatgaccagaagcgggaa
gagtattacaagcgcctgaagttcgagctggacatcattattcagatgggcttccccggc
tacttcctgatcgttatggactttatcaagtgggccaagaacaacggtgtaccggtaggc
cccggccggggttccggtgccggttccctggtggcctacgcgctgctgattacggatctt
gacccactggagtacgacctgctgtttgagcgattcctgaacccggaacgggtttccatg
ccggactttgacgtcgatttctgcatggaaggccgggaccgggtgatcgaatacaccgct
gagaaatacggccgggaagcggtttcccagatcattaccttcggtaccatggccgcaaag
gcggtggtgcgggatgtggcgagggtacagggcaagtcctacggcctggcagacaaactg
tccaagctgattccgtttgaagtgggcatgacgctcaacaaggctattgagcaggagccc
cagctcaaggagtttctggagcaggacgaagaagcccaggaaatctgggagatggccctc
aaactcgagggcgtttgccgtaacgccggcaagcatgccggtggcgtggtgattgcgccc
accaagattaccgatttctcgcccctgtactgtgacgacgaaggcggcagcctggtcaca
cagtttgacaaaggcgatgtggaagacgcgggcctggtgaagttcgacttcctgggtctt
cggaccctgaccatcatcaagtgggccttgcacatgattaacccgcgccgacaggcgcag
ggtcaatcagaactggacattgccaccatcccgctggaagacaagcgctccttcgagttg
ctcaaaaaggcggaaaccaccgccgttttccagctggaatcccgcggcatgaaagatctg
atccggcgcctgcagccggactccctggaagatatgatcgccctggtggccctgtttcgt
ccggggccgttgcagtcgggcatggtagacgactttatcgaccgtaagcatggccgccag
ccgttgtcttacccacacccggattatcagtatgaaggcctgaagccggtattggagccc
acttatggggttatcctctaccaggagcaggtcatgcagattgcccaggtgatggcgggc
tacaccctcggtaacgccgacatgctgcgccgggccatgggtaagaaaaagccggaagag
atggccaagcagaaggcattcttcctggagggttgtgccaataatggcatcgatgaaacc
ctggcggagaacatcttcgatctggtggaaaagttcgccggctacggtttcaacaaatcc
cactccgccgcctatgctctggtgtcgtatcagaccctgtggctcaaggcccactacccg
gccgaattcatggccgcagtactcaccgccgatatgcagaacaccgataaggtggtcacg
ctggtggaagagtgccggaacatgaagctggacctgctggtgccggacgtcagccggtcc
gcttacacctttaccgtcaatgacgacgggcagattgtttatggtcttggcgccatcaaa
gggttgggtgagggcccgattgatagcattgtggaggccgccaaagacggcccgttccag
gatattttcgatttctgccgccgggttgacctgaagaaggtcaacaagcgtgccatggag
gcgctgatccgggccggggccatggacaaactgggtgccgggcgcgcgcagctgatggcc
agtatcgacaaggccgtgcagcaggcagaccagcaatcccgaaacgatgccgccggcatg
atggatatgtttggcgaaatgctggagagcagcggtgagggtgaagacccctacgccgat
gtggcccatgtgcgggagtggcctgaaaaagaacgcctgaagggcgagaaggataccctt
ggtatctatcttacgggccatccgtttgatgaatacgagcgggaagtccggcgttttgtc
cgtaactccatcgcggatctgaagcccaacaagtcaccccagcgggtggctggcctggtg
gttgcccagcgcaccatgaaaacccgcacgggttccaccatgtgctttattacactggat
gaccgcagtgctcggatagaagccaccctgttctctgaggcgtttttcgagaaccgggaa
ctgctgcagtcagatcaggtgatcgttgtggaggggcaggtcagccacgatgactactcc
gggcaaatgaaaatgcgcgtcagttcagtgatggacgtggccaccgcgaggcagcagttc
agccgtggcatccggctggcgctgcacgcggaacagttgcagaacgggctgctggacaaa
ctggacgataccctgcgcccgttccgcaacgaaggcagcccggtgtggattgaatacagc
agtgctgaggccagaacccgcattgagctgggtgagtcctggcgagtacagccggatgac
aacctgttgttcgagctcagacacctggtaggcgagaagtccgtggaactggtctatgat
taa
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