Marinobacter shengliensis: MAALD49_26920
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Entry
MAALD49_26920 CDS
T09258
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mshe
Marinobacter shengliensis
Pathway
mshe02020
Two-component system
mshe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mshe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MAALD49_26920 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MAALD49_26920 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mshe03021
]
MAALD49_26920 (rpoN)
Transcription machinery [BR:
mshe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MAALD49_26920 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
GP67
Motif
Other DBs
NCBI-ProteinID:
BEH15324
LinkDB
All DBs
Position
2973115..2974650
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AA seq
511 aa
AA seq
DB search
MVMKASLQLKMGQSLTMTPQLQQAIRLLQLSTLDLQQEIQQALESNPMLETSEDDDQSDT
PDTDDDTRDEHKDRDSDHDEPATEAASDWDENENGPDWASENDIPDNIPDDLPVDTAWDD
IYQSAPAPASKGDDENESDFETRNSPAETLQDHLEWQLNLTPMSERDQAIAHALMDAVDE
RGYLTSPIEEIHSGLQDETEEDPLELDEVEAVLHRLQHFDPPGVFARDLQECLLIQLNQL
PPDTPWLRQARLVVTQFLHLLGNRDYAQLLRRSRLKEDQLREVLALITSLNPRPGDVVDR
AEPDYVIPDVIVRKHEGRWRVELNPEIAPRIRVNASYASLIRRADSSADNTYLRDQLQEA
KWFIKSLQSRNETLLKVATRIVEHQQGFLDQGEEAMKPLILSDIAQAVEMHESTISRVTT
QKYMHTPRGIFELKYFFSSHVSTAEGGECSSTAIRAMIKKLISEETPKKPLSDSKIAAML
GDQGINVARRTVAKYREAMHIPPSNERKRLV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggttatgaaagcctcattacagcttaagatgggccagagtctgaccatgacgccccag
ctgcaacaggccattcgcctgcttcagctttccaccctcgacctccagcaggaaatccag
caggcactggaatccaaccccatgctggaaacctccgaggatgacgatcagtctgacacc
cccgatacggatgacgatacccgggacgaacataaagaccgggattccgaccacgatgaa
ccagccactgaggctgcctctgactgggatgaaaacgaaaatggcccggactgggcttcc
gaaaacgacatcccggataacatccccgacgacctgcccgtagacaccgcctgggacgat
atctaccagtctgcaccggcgccagccagcaaaggggatgacgagaacgagtcggatttc
gaaacccgcaattcaccggccgagaccctccaggaccacctggaatggcagctcaacctg
acccccatgagcgagcgtgaccaggcaatcgcccacgccctgatggacgctgtggatgag
cgcggttacctgacctcaccgattgaggaaatccattccggcctgcaggacgaaactgaa
gaagacccccttgaactggacgaggtagaggcggtcctgcaccggctacaacacttcgac
ccgccgggcgtgttcgcccgggacctgcaggaatgcctgctgattcagctcaaccagttg
ccgccagataccccctggcttcgacaggcccgcctggtggttacccagttcctgcatttg
ctgggcaaccgggattacgcgcaactgctgcgccgcagcagactcaaagaagatcagttg
cgcgaggttctggccctgattaccagcctcaaccctcgcccgggtgatgtggtagaccga
gcggagccggattacgtgataccggacgtcatcgtccgaaaacacgagggccggtggcgt
gttgagctcaatccggagatcgccccgagaattcgggtcaacgccagctacgcatcactg
atccgtcgcgccgatagcagtgctgataacacctacctgcgggatcaactgcaggaggcc
aagtggttcattaaaagcctgcaaagccgcaatgaaacgctgctgaaagtcgccacccgg
attgttgagcaccaacagggtttcctggaccagggggaggaagcgatgaaaccgctgatc
ctctcggacatcgcacaggccgtggaaatgcacgaatccaccatttcacgggtcaccact
caaaagtatatgcacacaccccgcggcattttcgagctgaagtactttttctccagccac
gtcagtaccgctgagggcggagaatgttcctccaccgctattcgtgcgatgatcaagaaa
ctgatttcagaagaaactccaaaaaagccgttgagcgatagcaagattgcagccatgctt
ggagatcagggcatcaatgtggcccggcgcaccgttgccaaataccgggaggccatgcac
atccctccttcaaacgagcgcaagagactggtttaa
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