KEGG   Marinobacter shengliensis: MAALD49_26920
Entry
MAALD49_26920     CDS       T09258                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mshe  Marinobacter shengliensis
Pathway
mshe02020  Two-component system
mshe02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mshe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MAALD49_26920 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    MAALD49_26920 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mshe03021]
    MAALD49_26920 (rpoN)
Transcription machinery [BR:mshe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MAALD49_26920 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID GP67
Other DBs
NCBI-ProteinID: BEH15324
LinkDB
Position
2973115..2974650
AA seq 511 aa
MVMKASLQLKMGQSLTMTPQLQQAIRLLQLSTLDLQQEIQQALESNPMLETSEDDDQSDT
PDTDDDTRDEHKDRDSDHDEPATEAASDWDENENGPDWASENDIPDNIPDDLPVDTAWDD
IYQSAPAPASKGDDENESDFETRNSPAETLQDHLEWQLNLTPMSERDQAIAHALMDAVDE
RGYLTSPIEEIHSGLQDETEEDPLELDEVEAVLHRLQHFDPPGVFARDLQECLLIQLNQL
PPDTPWLRQARLVVTQFLHLLGNRDYAQLLRRSRLKEDQLREVLALITSLNPRPGDVVDR
AEPDYVIPDVIVRKHEGRWRVELNPEIAPRIRVNASYASLIRRADSSADNTYLRDQLQEA
KWFIKSLQSRNETLLKVATRIVEHQQGFLDQGEEAMKPLILSDIAQAVEMHESTISRVTT
QKYMHTPRGIFELKYFFSSHVSTAEGGECSSTAIRAMIKKLISEETPKKPLSDSKIAAML
GDQGINVARRTVAKYREAMHIPPSNERKRLV
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggttatgaaagcctcattacagcttaagatgggccagagtctgaccatgacgccccag
ctgcaacaggccattcgcctgcttcagctttccaccctcgacctccagcaggaaatccag
caggcactggaatccaaccccatgctggaaacctccgaggatgacgatcagtctgacacc
cccgatacggatgacgatacccgggacgaacataaagaccgggattccgaccacgatgaa
ccagccactgaggctgcctctgactgggatgaaaacgaaaatggcccggactgggcttcc
gaaaacgacatcccggataacatccccgacgacctgcccgtagacaccgcctgggacgat
atctaccagtctgcaccggcgccagccagcaaaggggatgacgagaacgagtcggatttc
gaaacccgcaattcaccggccgagaccctccaggaccacctggaatggcagctcaacctg
acccccatgagcgagcgtgaccaggcaatcgcccacgccctgatggacgctgtggatgag
cgcggttacctgacctcaccgattgaggaaatccattccggcctgcaggacgaaactgaa
gaagacccccttgaactggacgaggtagaggcggtcctgcaccggctacaacacttcgac
ccgccgggcgtgttcgcccgggacctgcaggaatgcctgctgattcagctcaaccagttg
ccgccagataccccctggcttcgacaggcccgcctggtggttacccagttcctgcatttg
ctgggcaaccgggattacgcgcaactgctgcgccgcagcagactcaaagaagatcagttg
cgcgaggttctggccctgattaccagcctcaaccctcgcccgggtgatgtggtagaccga
gcggagccggattacgtgataccggacgtcatcgtccgaaaacacgagggccggtggcgt
gttgagctcaatccggagatcgccccgagaattcgggtcaacgccagctacgcatcactg
atccgtcgcgccgatagcagtgctgataacacctacctgcgggatcaactgcaggaggcc
aagtggttcattaaaagcctgcaaagccgcaatgaaacgctgctgaaagtcgccacccgg
attgttgagcaccaacagggtttcctggaccagggggaggaagcgatgaaaccgctgatc
ctctcggacatcgcacaggccgtggaaatgcacgaatccaccatttcacgggtcaccact
caaaagtatatgcacacaccccgcggcattttcgagctgaagtactttttctccagccac
gtcagtaccgctgagggcggagaatgttcctccaccgctattcgtgcgatgatcaagaaa
ctgatttcagaagaaactccaaaaaagccgttgagcgatagcaagattgcagccatgctt
ggagatcagggcatcaatgtggcccggcgcaccgttgccaaataccgggaggccatgcac
atccctccttcaaacgagcgcaagagactggtttaa

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