Marinobacter shengliensis: MAALD49_33030
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Entry
MAALD49_33030 CDS
T09258
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mshe
Marinobacter shengliensis
Brite
KEGG Orthology (KO) [BR:
mshe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mshe03016
]
MAALD49_33030 (truB)
Enzymes [BR:
mshe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MAALD49_33030 (truB)
Transfer RNA biogenesis [BR:
mshe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MAALD49_33030 (truB)
Prokaryotic type
MAALD49_33030 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BEH15935
LinkDB
All DBs
Position
complement(3622819..3623742)
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AA seq
307 aa
AA seq
DB search
MSRRRKGRDVNGILVIDKPQGVTSNGILQQIKRLYGAAKAGHTGALDPLATGVLPLCFGE
ATKFSQTMLDSDKAYITTARLGIRTETGDSEGAVVEEKPVPALTEAQVEAVLERFRGDIQ
QVPSMYSALKHKGRPLYEYAREGIEIERPARPVTIYELTLLAVREQELDLAVTCTKGTYI
RSLVEDIGAVLGCGAHVSALRRTLASGYTLENAHDVKDLEAMRERGESLDGLLLPPESAL
TMFPEHRLSGSALVSILNGQPVRISGQSLEGFVRVYGDRNFVGLAEAMPEGDDTKLVPRR
LVKNSGG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgaagacgtaaaggccgtgacgtaaatggcatcctggtgatcgacaagccccag
ggtgtcacctccaacgggattctgcagcagatcaagcgcctgtatggggcggccaaggcc
ggccataccggtgcccttgatccacttgctactggtgttttgccgctgtgttttggcgaa
gccaccaagttttcccagaccatgctcgacagtgacaaggcgtatatcactaccgcgcgg
ttgggcatacggacagaaaccggtgatagcgaaggcgcagtggttgaagaaaaaccggtg
ccagcgttgaccgaagcccaggtggaagcggtgttagagcggtttcggggcgatatccag
caggtaccgtcgatgtattccgcgctgaagcacaaaggccggccactgtacgagtatgcc
cgcgaaggcattgagatcgagcgcccggcgcgtcctgtcaccatctacgagttgaccctg
ttggcggttcgcgagcaggagcttgacttggcggtgacctgtaccaagggtacgtatata
cgctcactggttgaagatattggtgcggtacttgggtgcggtgcccatgtcagtgcactt
cggcgtaccctggcctctggctacacgctggaaaatgctcacgatgtcaaagacctggaa
gccatgcgtgagcgcggtgagagcctggacggcttgctgctgccgccggaaagcgcgctg
acgatgtttcccgagcaccggctgtcaggctcggcactggtatcgatattgaacggacaa
ccggttagaatatcgggtcagtcccttgaaggcttcgtgcgtgtctacggcgatcgtaac
ttcgtgggattggcagaagctatgccggagggcgatgacaccaaactggtgccgcgccgt
ctggtaaagaacagtggcgggtaa
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