Marinobacter shengliensis: MAALD49_35980
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Entry
MAALD49_35980 CDS
T09258
Symbol
hepA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mshe
Marinobacter shengliensis
Brite
KEGG Orthology (KO) [BR:
mshe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mshe03021
]
MAALD49_35980 (hepA)
Transcription machinery [BR:
mshe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
MAALD49_35980 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Tudor_RapA
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BEH16230
LinkDB
All DBs
Position
complement(3941794..3944655)
Genome browser
AA seq
953 aa
AA seq
DB search
METSEFVIGQRWVSHSDTALGLGIVTDISGRRVTLGFPAADEERTYAIDNAPLSRIVYQL
GEEIETYDGERYIVRAVEDLHGVLMYHADDGENIQQISEVKLAGSVNFSAPHQRLFAGQF
DRNGAFRLRVSTLQHLDRLRASPAQGLIGARTQHLPHQLYIAHEVARRHAPRVLLADEVG
LGKTIEAGLILHYQLHTGRARRALIVVPDSLIHQWLVEMLRRFNLRFSIVDQSRYDDIKA
QEDDVDALVNHIFGDDDSVNPFEADQLVLCSLDFLVQSEQARDHALAAGWDLMVVDEAHH
LAWSPEQASPEYQLVESLSEASKGLLLLTATPEQVGVASHFARLRLLDPARFHSLDAFRE
EEQQYEVINKVVRRLLETPDRIDPEDKIALAGWLGDELEELLARDGAHQAVIDALLDRHG
TGRVLFRNTRAAIQGFPERQPLPEPLPCPALYDDCRYGDVGLAPEQTAPEEQWLADDPRV
AWLEKKLASLRPAKVVVICARADTAMALEHYLQLRAGIRSAAFHEHLSLLERDRAAAYFA
DSEQGAQALICSEIGSEGRNFQFAHHLVLFDLPANADLLEQRIGRLDRIGQTEAIRIHIP
YLQGTSQEVQYRWFQEGLNAFAESCAVGVAVHDQVGDEWQKALDGDDAALEPMLASSAEE
TARLKTLLHNGRDALIELNSCRRDEAEALIASIEQEESSAQVRDYMVQAFDILGVDIEDH
SEHADVLKPGEQYQAGHVAELPEDGLTVTWEREQALQREDMAFMSWEHPMVTGVMDSVTS
SGLGKAALANLSVKALPPGTLLLEALFAVHCPAPESLQLTRYLPVSPLRLVVDVNGRDLS
NALPHDRLNELCSNIRRRTAQAIVPKIRAEVETMVDHVERLAEPHLARLQAQALAQVEAG
FVPEVRRLEALQRVNPAIRSEEIDYLRDQLDAAREAVGHASLALEGIRVIVTS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacatcggaatttgtcatcggtcagcgttgggtgagccacagcgataccgctttg
ggtttgggtatcgttaccgacatctcggggcgcagagttaccctggggtttccggcggcc
gatgaagagcgcacctacgccatcgataatgcgcctttgtcgcgcattgtctatcagctg
ggtgaggagatagagacctacgacggcgagcgttacattgttcgcgccgttgaggatctc
cacggtgttctgatgtaccacgccgatgatggcgaaaatatccagcagatctccgaggta
aagctggccggttcggtcaatttttcggcaccgcaccagcgcctgttcgccggtcagttt
gaccgtaacggtgccttccggttacgggtctccacgctccagcatctcgatcggctcaga
gcttcgccggcccaggggttgattggcgcccgtacccagcatttgcctcaccagctatac
attgcccacgaagtggcgcgccgccatgcccccagagtgttactggccgatgaggtgggt
ttgggcaaaaccattgaggctggcctgatcctgcactatcagctgcacaccggccgggcc
cgaagggcactgattgtggtgccggattcactgattcaccagtggctggtggagatgctg
cgccgcttcaatctgcgcttctcgatagtggaccagagccgctacgacgacatcaaagcc
caggaagacgatgtagacgccctggtaaaccacatcttcggcgacgacgacagcgtcaac
ccgttcgaggcggaccagctggtgttgtgcagtctcgattttctggtgcagagcgaacag
gcccgtgaccatgccctggcggcgggttgggacctgatggtggtggacgaagcccaccac
ctggcctggtcgccggaacaggccagcccggaatatcagctggttgaaagcctgtctgag
gccagcaaaggcctgttgctgctgaccgctacgccggaacaggtgggtgtggccagtcat
ttcgcccgtttgcgcttgctggacccggcacggttccactccctggacgcgttccgggag
gaggaacagcaatacgaggtcatcaacaaagtggtgcgccggctgcttgaaactccggac
cgaattgatccggaagataaaatcgcccttgctggctggttgggtgatgagctggaggaa
cttctggcccgagatggcgcccaccaggcggtgattgatgcgttgctggaccgccatggc
accggccgggtgctgttccgcaacacccgggcagcgattcagggcttcccggagcgccag
ccgctgccggaacccctgccgtgtcctgctctttacgatgattgtcgctacggtgatgtt
ggcctggcgcctgaacagacggcgccggaagagcaatggctggcggacgatccgcgagtg
gcctggctggagaaaaaacttgccagcctgcgcccggccaaagtggtggtgatctgcgcc
cgggctgatacggccatggcgcttgagcattacctgcagttgcgggccggcattcgcagt
gccgccttccatgagcacctgagcctgctggagcgggatcgtgccgccgcctattttgcc
gacagcgagcagggcgcccaggcgctgatctgttcggaaatcggcagtgagggccgtaac
ttccagtttgcccaccacctggtgctgtttgatttgcccgccaacgcggacctgctggaa
cagcggattggccggctggaccgcatcggccagaccgaggccatccggattcacataccc
tacctgcagggcaccagccaggaagtacagtaccgctggttccaggaagggctgaacgcc
tttgccgagagttgtgccgtcggtgtggcggttcacgaccaggtgggtgacgagtggcag
aaggccctggacggcgatgacgccgcccttgaacccatgctggcaagcagtgccgaggaa
actgcgcggctgaaaaccctgctgcacaacggccgggatgccctgattgagctcaactcc
tgccgccgggatgaagccgaagccttgattgccagtatcgagcaggaggaaagctcggcc
caggtccgtgattacatggtgcaggcgttcgatattctgggtgtggatatagaagatcac
agcgagcatgccgatgtgctcaagcctggcgaacaataccaggctggccatgttgccgag
ctgccggaggacggcctgaccgtcacctgggagcgtgaacaggccctgcagcgggaagat
atggcgttcatgagctgggagcacccgatggtgaccggcgtgatggattctgtcaccagc
tcgggcctgggcaaagcggcgctggccaatctgtccgtgaaggcactgccgcccggcacc
ctgctgctggaggccctgtttgccgtacactgcccggcgccggagtccttacagttgacc
cgctatctgccggtttcgccgctgcgcctggtggtggatgtgaatggccgggacctgtcc
aacgcgttacctcatgatcgcctgaatgagctgtgctccaacattcgccggcgcacggca
caggccatcgtgccaaagatccgggccgaggtggaaaccatggtggaccacgttgagcga
ctggcagagccgcatctggcacggctgcaggcgcaagccctggcgcaggttgaggcgggc
tttgttcccgaggtgcgccggctggaagcattacagcgggtaaacccggccattcgcagt
gaagaaatcgattatctgcgcgaccagctggatgctgcccgggaagcggtgggccacgcc
agtcttgcgctggaaggtattcgggtgattgttacctcctga
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