Mycobacterium shigaense: MSG_01024
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Entry
MSG_01024 CDS
T05717
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mshg
Mycobacterium shigaense
Pathway
mshg03018
RNA degradation
mshg05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSG_01024 (groL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
MSG_01024 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mshg03019
]
MSG_01024 (groL1)
03110 Chaperones and folding catalysts [BR:
mshg03110
]
MSG_01024 (groL1)
03029 Mitochondrial biogenesis [BR:
mshg03029
]
MSG_01024 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mshg04147
]
MSG_01024 (groL1)
Enzymes [BR:
mshg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSG_01024 (groL1)
Messenger RNA biogenesis [BR:
mshg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSG_01024 (groL1)
Chaperones and folding catalysts [BR:
mshg03110
]
Heat shock proteins
HSP60 / Chaperonin
MSG_01024 (groL1)
Mitochondrial biogenesis [BR:
mshg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSG_01024 (groL1)
Exosome [BR:
mshg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSG_01024 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
MSG_01024 (groL1)
Exosomal proteins of breast cancer cells
MSG_01024 (groL1)
Exosomal proteins of colorectal cancer cells
MSG_01024 (groL1)
Exosomal proteins of bladder cancer cells
MSG_01024 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KfrA_N
Fe-ADH
DUF7391
Motif
Other DBs
NCBI-ProteinID:
BAX91183
UniProt:
A0A1Z4EDZ9
LinkDB
All DBs
Position
1067425..1069047
Genome browser
AA seq
540 aa
AA seq
DB search
MSKLIEYDETARRGIEAGVNKLADAVRVTLGPRGRHVVLAKAFGGPTVTNDGVTVAREID
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQALVKGGLRQVAAGANPIALGAGIS
KAADAVSEALLGAATPVSGKDGIAQVATVSSRDEQIGELVGEGMNKVGADGVVSVEESST
LNTELEFTEGVGFDKGFLSAYFVTDFDSQEAVLDDPLILLHQEKISSLPDLLPILEKVAE
SGKPLLIIAEDVEGEALATLVVNAIRKTLKAVAVKAPFFGDRRKAFLEDLAIVTGGQVIN
PDAGLLLREVGAEVLGSARRVVVSKDETIIVDGGGSKDAVENRVKQLRAEIENSDSDWDR
EKLQERVAKLAGGVAVIKVGAATETALKERKESVEDAVAAAKAAVEEGIVAGGGSALIQA
GKALDGLRSSLKGDEAAGVGVFAEALTAPLYWIATNAGLDGAVAVSKVRDLPAGQGLNAA
TLEYGDLIKQGVIDPVKVTRSAVLNAASVARMVLTTETAVVDKPADEDDDHGHGHGHHHH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagctgattgagtacgacgaaaccgcgcgtcgtggcatcgaggcgggcgtgaac
aagctcgccgacgcggtacgtgtgacgctcgggccgcgcggccggcatgtggtgctggcc
aaggccttcggcggacccacggtcaccaacgacggcgtgaccgtcgcacgcgagatcgac
ctggaagacccgttcgagaacctgggcgcccagctagtcaagtcggtggccaccaagacc
aacgacgtcgccggcgacggcaccaccaccgcgaccgtgctggcccaggcgctggtcaag
ggcggtctgcggcaggtggcagcgggcgccaacccgatcgcgctgggcgcgggcatcagc
aaggccgctgacgcggtgtccgaggcgctgctgggcgccgccaccccggtgtccggcaag
gacggtatcgcgcaggtggccacggtctcctcgcgagacgagcagatcggtgagctggtc
ggcgagggcatgaacaaggtcggcgccgacggcgtcgtcagtgtcgaggagtcctcgaca
ctgaacaccgagctggaattcaccgagggcgtcggcttcgacaagggcttcctgtcggcg
tacttcgtgaccgacttcgactcgcaggaggcggtgctcgacgacccgttgatcctgctg
caccaggagaagatcagctccctgcccgacctgctgccgatcctggagaaggtcgccgaa
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggcactggccacgctg
gtggtcaacgccatccgcaagacgctcaaggcggtcgcggtcaaggcgccgttcttcggc
gaccggcgcaaggcgttcctcgaggacctggcgatcgtgacggggggccaggtcatcaac
cccgacgccggcctgctgttgcgcgaggtgggcgccgaggtgctcggctcggcccgccgc
gtggtggtcagcaaggacgagaccatcatcgtcgacggcggcggctccaaggacgcggtg
gaaaaccgcgtcaagcagctgcgcgccgagatcgagaacagcgactcggactgggatcgc
gaaaagctgcaggagcgggtggcgaagctggccggcggcgtggccgtcatcaaggtcggc
gccgccaccgagaccgcgctcaaggagcgcaaggagagtgtcgaggatgccgtcgcggcc
gccaaggcggcggtcgaggagggcatcgtcgccggcggcggatcggcgctcatccaggcc
ggtaaggcgctcgacggcctgcgctcgtcgctgaagggcgacgaggccgccggtgtcggg
gtgttcgccgaggcactcactgcgccgttgtactggatcgccaccaacgcggggctcgac
ggcgccgtcgcggtcagcaaggtccgggatctgcctgccgggcagggcctcaacgcggcc
acgctggagtacggtgacctgatcaagcagggcgttatcgacccggtgaaggtcacccgg
tcggcggtgctcaacgcggcgtcggtggcccgcatggtgctgaccaccgagacggcggtc
gtcgacaagccggccgacgaagacgatgaccacggtcatggccacggccatcaccaccac
tag
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