KEGG   Mycobacterium shigaense: MSG_01587
Entry
MSG_01587         CDS       T05717                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HU homolog
  KO
K03530  DNA-binding protein HU-beta
Organism
mshg  Mycobacterium shigaense
Brite
KEGG Orthology (KO) [BR:mshg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mshg03032]
    MSG_01587 (hup)
   03036 Chromosome and associated proteins [BR:mshg03036]
    MSG_01587 (hup)
   03400 DNA repair and recombination proteins [BR:mshg03400]
    MSG_01587 (hup)
DNA replication proteins [BR:mshg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    MSG_01587 (hup)
Chromosome and associated proteins [BR:mshg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    MSG_01587 (hup)
DNA repair and recombination proteins [BR:mshg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      MSG_01587 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HC2 HU-CCDC81_bac_2 HU-HIG HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: BAX91741
UniProt: A0A1Z4EFJ2
LinkDB
Position
1636293..1636940
AA seq 215 aa
MVNKAELIDVLAQKLGSDRRQATAAVENFVDTVVRAVQKGESVTITGFGVFEQRRRAARV
ARNPRTGETVKVRPTSVPAFRPGAQFKAVVSGAQRLPSEGPAVKRGVVAGVAKKAAAKKA
PAKKAAVKKAAPAKKAAPVKKAAVKKAPVKKAPVKKAAVKKAVTKAPVRKAATKAPAKKV
ATKAPVRKAATKAPAKKAAVKKAPAKKTAAKRGRK
NT seq 648 nt   +upstreamnt  +downstreamnt
atggtcaacaaagcagagctcattgatgtgctcgcacagaaattgggctcggaccgtcgg
caggcgaccgccgccgtcgaaaatttcgtcgacaccgtcgtgcgtgcggtgcagaagggc
gagagcgtaaccattaccggtttcggcgtgttcgaacagcgccgccgcgcagcgcgtgtg
gcgcgtaacccgcgtaccggtgagacggtgaaagttaggccgacgtccgttccggcgttc
cgtccgggtgctcaattcaaagcggttgtctctggggcacagcgcctcccgtcggaagga
cctgccgtgaaacgtggtgttgtcgcaggcgtcgccaagaaggctgcggccaagaaggcg
cccgccaagaaggccgcggtgaagaaggctgcgccggcgaagaaggccgcgccggtcaag
aaggccgcggtgaagaaggctccggtgaagaaggctccggtgaagaaggccgcggtgaag
aaggccgtgaccaaggctccggtgcgcaaggccgcgaccaaggcgccggccaagaaggtt
gcgaccaaggctccggtgcgcaaggccgcgaccaaggccccggccaagaaggccgcggtc
aagaaggctccggccaagaagaccgccgcaaagcgcggtcgcaagtaa

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