Mycobacterium shigaense: MSG_01587
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Entry
MSG_01587 CDS
T05717
Symbol
hup
Name
(GenBank) DNA-binding protein HU homolog
KO
K03530
DNA-binding protein HU-beta
Organism
mshg
Mycobacterium shigaense
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mshg03032
]
MSG_01587 (hup)
03036 Chromosome and associated proteins [BR:
mshg03036
]
MSG_01587 (hup)
03400 DNA repair and recombination proteins [BR:
mshg03400
]
MSG_01587 (hup)
DNA replication proteins [BR:
mshg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MSG_01587 (hup)
Chromosome and associated proteins [BR:
mshg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MSG_01587 (hup)
DNA repair and recombination proteins [BR:
mshg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MSG_01587 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BAX91741
UniProt:
A0A1Z4EFJ2
LinkDB
All DBs
Position
1636293..1636940
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AA seq
215 aa
AA seq
DB search
MVNKAELIDVLAQKLGSDRRQATAAVENFVDTVVRAVQKGESVTITGFGVFEQRRRAARV
ARNPRTGETVKVRPTSVPAFRPGAQFKAVVSGAQRLPSEGPAVKRGVVAGVAKKAAAKKA
PAKKAAVKKAAPAKKAAPVKKAAVKKAPVKKAPVKKAAVKKAVTKAPVRKAATKAPAKKV
ATKAPVRKAATKAPAKKAAVKKAPAKKTAAKRGRK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacaaagcagagctcattgatgtgctcgcacagaaattgggctcggaccgtcgg
caggcgaccgccgccgtcgaaaatttcgtcgacaccgtcgtgcgtgcggtgcagaagggc
gagagcgtaaccattaccggtttcggcgtgttcgaacagcgccgccgcgcagcgcgtgtg
gcgcgtaacccgcgtaccggtgagacggtgaaagttaggccgacgtccgttccggcgttc
cgtccgggtgctcaattcaaagcggttgtctctggggcacagcgcctcccgtcggaagga
cctgccgtgaaacgtggtgttgtcgcaggcgtcgccaagaaggctgcggccaagaaggcg
cccgccaagaaggccgcggtgaagaaggctgcgccggcgaagaaggccgcgccggtcaag
aaggccgcggtgaagaaggctccggtgaagaaggctccggtgaagaaggccgcggtgaag
aaggccgtgaccaaggctccggtgcgcaaggccgcgaccaaggcgccggccaagaaggtt
gcgaccaaggctccggtgcgcaaggccgcgaccaaggccccggccaagaaggccgcggtc
aagaaggctccggccaagaagaccgccgcaaagcgcggtcgcaagtaa
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