Mycobacterium shigaense: MSG_01635
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Entry
MSG_01635 CDS
T05717
Symbol
fpg1
Name
(GenBank) formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mshg
Mycobacterium shigaense
Pathway
mshg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSG_01635 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mshg03400
]
MSG_01635 (fpg1)
Enzymes [BR:
mshg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MSG_01635 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSG_01635 (fpg1)
DNA repair and recombination proteins [BR:
mshg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSG_01635 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BAX91789
UniProt:
A0A1Z4EFR7
LinkDB
All DBs
Position
1724378..1725238
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AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLAAHVVGKTITAVRVHHPRAVRRHEAGPADLTARLLGERITGTDRRG
KYLWLLLGPDPEPATALVVHLGMSGQMLLGEVPRADHVRISALLDDGTVLSFADQRTFGG
WMLADLVEVDGSVVPQPVAHLARDPLDPRFDRDAVVKVLRGKHSEIKRQLLDQQVVSGIG
NIYADEALWRAKVNGARIAAMLSRRRLTDVLDAAAAVMREALAKGGTSFDSLYVNVNGQS
GYFDRSLDAYGRADEPCRRCGAAMRREKFMNRSSFYCPRCQPRPRR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaagtcgaggtggtgcgccgcggcctggccgcccacgtggtgggc
aagacgatcaccgcggtgcgcgtccaccacccccgcgcggtgcgccgccacgaggccggg
cccgccgacctcacggcgcggctgcttggcgagcggatcaccgggaccgaccggcgcggc
aagtacctgtggctgctgctgggcccggaccccgagccggcgaccgcgctcgtcgtccac
ctcggcatgagcgggcagatgctgctcggcgaggtgccgcgagccgaccacgtgcggatc
tccgcgctgctcgacgacggaaccgtgctcagcttcgccgatcagcggaccttcggcggg
tggatgctggccgacctcgtcgaggtggacggcagcgtggtgcctcagcccgtggcccac
ctggcgcgcgacccgctggacccgcggttcgaccgcgacgcggtggtgaaggtgttgcgc
ggcaagcattccgagatcaaacgccaactgctggaccagcaggtggtgtcgggtatcggc
aacatctacgccgacgaggcgctgtggcgggccaaggtcaacggcgcccggatcgcggcc
atgctgagccgccgccggctgaccgatgtcctggacgccgccgctgccgtgatgcgcgag
gcgctcgccaagggcgggacgtcgttcgactcgctctatgtcaacgtcaacggccaatcg
ggctacttcgaccggtccctggatgcctacggccgcgcggacgaaccctgccggcgctgc
ggcgcggccatgcgccgggagaagttcatgaaccggtcgtcgttctactgccccaggtgc
cagccgcggccccgccgttga
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