Mycobacterium shigaense: MSG_01804
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Entry
MSG_01804 CDS
T05717
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mshg
Mycobacterium shigaense
Pathway
mshg00300
Lysine biosynthesis
mshg00470
D-Amino acid metabolism
mshg01100
Metabolic pathways
mshg01110
Biosynthesis of secondary metabolites
mshg01120
Microbial metabolism in diverse environments
mshg01230
Biosynthesis of amino acids
Module
mshg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MSG_01804 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MSG_01804 (dapF)
Enzymes [BR:
mshg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MSG_01804 (dapF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BAX91957
UniProt:
A0A1Z4EG73
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All DBs
Position
1896734..1897603
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AA seq
289 aa
AA seq
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MIFSKGHGTENDFVLLPDIECGIAVSALRVATLCDRRRGLGADGVLRVTTAGAALTAGVL
DRLPDGVASADWFMDYRNADGSIAQMCGNGVRVFAHYLRASGMEARDEFVVGSVAGPRLV
ALHRVDATSADVTVDMGKANRLGGGEAVVGGRRFTGLAVDVGNPHLACVDARLSVDELEA
LDVGAPVQFDPAQFPDGANVEVLTAATGGVVHMRVHERGVGETRSCGTGTVAAAVAALAD
AGTDTGTLTVRVPGGEVTVTVTDATSYLRGPSVLVARGEIADDWWNALR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgatcttcagtaaggggcacggcaccgagaacgacttcgtgctgctgcccgacatcgag
tgtgggatcgccgtgtccgctttgcgggtggccacgctctgcgaccggcgccgcgggttg
ggcgccgacggggtgctgcgggtgaccacggcgggcgccgcgctgaccgccggtgtgctc
gatcgcctgccggacggcgtcgcctccgccgactggttcatggactaccgcaacgccgac
gggtcgatcgcgcagatgtgcggcaacggcgtgcgggtgttcgcgcactacctgcgggcc
agcggcatggaggcccgcgacgagttcgtggtcggctcggtggccggcccgcgcctggtg
gcgctgcaccgcgtcgacgcgaccagcgccgacgtcaccgtcgacatgggcaaggcgaac
cggctgggcggcggcgaagccgtcgtcggtggccggcgattcaccgggctggcggtcgac
gtgggcaatccgcacctggcgtgcgtggacgcgcggctgagcgtcgacgagctcgaggcc
ctcgacgtaggggcgccggtgcagttcgacccggcgcaattcccggatggcgccaacgtc
gaagttctcaccgcggcgaccgggggagtcgtgcacatgcgggtgcacgagcgcggcgtg
ggcgaaacccggtcctgtggcaccggaaccgtcgcggccgcggtggcggcgctggccgac
gccggcaccgacaccgggaccctgaccgtgcgggtgccgggcggcgaggtcaccgtcacc
gtcaccgatgccaccagctacttgcgggggccctcggtgctggtggcccgcggcgaaatc
gccgacgactggtggaacgccctgcggtga
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