KEGG   Mycobacterium shigaense: MSG_01847
Entry
MSG_01847         CDS       T05717                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mshg  Mycobacterium shigaense
Brite
KEGG Orthology (KO) [BR:mshg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mshg03016]
    MSG_01847
Enzymes [BR:mshg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     MSG_01847
Transfer RNA biogenesis [BR:mshg03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    MSG_01847
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: BAX92000
UniProt: A0A1Z4EGG8
LinkDB
Position
complement(1936663..1937958)
AA seq 431 aa
MGEPAADAPGSTEPEPIPLLHPAEGVPELAVTVREIAAAAELLGGGHGSFAVDAERASGF
RYSNRAYLIQIRRAGAGTVLIDPVSHGTDSLTALRPVAEVLSTDEWILHSADQDLPCLAE
VGLHPPALYDTELAGRLGGFDRVNLATMVERLLGFGLVKGHGAADWSKRPLPGEWLNYAA
LDVELLIELRAAIAQVLADQGKADWAAQEFEYLRTAGAREAVPAVRRDRWRRTSGIHKVR
DRRGLAAVRELWLTRDVIAQRRDVAPRRILPDSAIIDAALADPKTAEELVKLPVFGGRNQ
RRSASVWLGALQAARDSRNQPEDAEPLNGPPPAARWSRRKPEAAARLEAARAGLAEVSQR
VGVPAENLISPDLVRRLCWDWEPAADPVAAVEDFLRAGQARPWQRELVVGALAEAVQPPT
DARDRPDVAGT
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgggcgaaccggcggccgatgcgcccggcagcactgaacccgaaccgatcccgctactg
caccccgccgagggggtgcccgagctcgcggtgaccgtccgcgagatcgccgcggccgcg
gagttgctgggcggcgggcacggctcgttcgcggtggacgccgagcgggcgtcgggcttc
cgctactccaatcgcgcgtacctcatccagatccggcgggccggcgccggcactgtgctc
atcgacccggtcagccacggcaccgattcgctgaccgcgctgcgcccggtcgccgaggtg
ctcagcaccgacgagtggatcctgcattccgcggatcaggatctgccgtgcctggccgag
gtgggcctgcacccaccggccctctacgacaccgagctggccgggcggctgggcggcttc
gaccgggtcaacctcgccacgatggtcgaacggctgctcggcttcgggctggtcaagggc
cacggcgcggccgactggtcgaagcgtccgctgcccggcgaatggctgaactacgcggcc
ctcgacgtcgagctgctgatcgagctgcgcgccgcgatcgcccaggttttggccgatcaa
ggcaaagccgattgggccgcacaagaattcgaatacctgcggaccgcgggcgcccgggag
gcggtcccggcggtgcgacgggaccgctggcggcggacgtcgggaatccacaaggtgcgc
gaccggcgcggcctggccgcggtccgcgagctgtggctgacccgcgatgtcatcgcccag
cggcgcgacgtcgccccccgccgcatcctgcccgattcggccatcatcgacgccgccctc
gccgatccgaaaacggcggaggaactggtcaagctgccggtgttcggcgggcgcaatcag
cgccgcagcgcgtcggtgtggctgggggcgctgcaggcggcccgggacagccgcaatcag
cccgaggacgccgaaccgttgaacgggccgccgccggcggcgcggtggagccggcgcaag
cccgaggccgccgcacggctggaggccgcccgggccgggctggcggaggtgtcgcagcgg
gtgggggtgccggccgagaacctgatctcccccgacctggtgcggcggttgtgctgggac
tgggaaccggccgcagacccggtcgccgccgtcgaggacttcctgcgcgccggtcaggcg
cgaccgtggcagcgcgaactcgtcgtcggcgcgctggccgaggcggtgcagccgcctacc
gacgcccgcgaccgcccggacgtggccggcacctga

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