Mycobacterium shigaense: MSG_01847
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Entry
MSG_01847 CDS
T05717
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mshg
Mycobacterium shigaense
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mshg03016
]
MSG_01847
Enzymes [BR:
mshg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MSG_01847
Transfer RNA biogenesis [BR:
mshg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MSG_01847
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAX92000
UniProt:
A0A1Z4EGG8
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All DBs
Position
complement(1936663..1937958)
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AA seq
431 aa
AA seq
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MGEPAADAPGSTEPEPIPLLHPAEGVPELAVTVREIAAAAELLGGGHGSFAVDAERASGF
RYSNRAYLIQIRRAGAGTVLIDPVSHGTDSLTALRPVAEVLSTDEWILHSADQDLPCLAE
VGLHPPALYDTELAGRLGGFDRVNLATMVERLLGFGLVKGHGAADWSKRPLPGEWLNYAA
LDVELLIELRAAIAQVLADQGKADWAAQEFEYLRTAGAREAVPAVRRDRWRRTSGIHKVR
DRRGLAAVRELWLTRDVIAQRRDVAPRRILPDSAIIDAALADPKTAEELVKLPVFGGRNQ
RRSASVWLGALQAARDSRNQPEDAEPLNGPPPAARWSRRKPEAAARLEAARAGLAEVSQR
VGVPAENLISPDLVRRLCWDWEPAADPVAAVEDFLRAGQARPWQRELVVGALAEAVQPPT
DARDRPDVAGT
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaccggcggccgatgcgcccggcagcactgaacccgaaccgatcccgctactg
caccccgccgagggggtgcccgagctcgcggtgaccgtccgcgagatcgccgcggccgcg
gagttgctgggcggcgggcacggctcgttcgcggtggacgccgagcgggcgtcgggcttc
cgctactccaatcgcgcgtacctcatccagatccggcgggccggcgccggcactgtgctc
atcgacccggtcagccacggcaccgattcgctgaccgcgctgcgcccggtcgccgaggtg
ctcagcaccgacgagtggatcctgcattccgcggatcaggatctgccgtgcctggccgag
gtgggcctgcacccaccggccctctacgacaccgagctggccgggcggctgggcggcttc
gaccgggtcaacctcgccacgatggtcgaacggctgctcggcttcgggctggtcaagggc
cacggcgcggccgactggtcgaagcgtccgctgcccggcgaatggctgaactacgcggcc
ctcgacgtcgagctgctgatcgagctgcgcgccgcgatcgcccaggttttggccgatcaa
ggcaaagccgattgggccgcacaagaattcgaatacctgcggaccgcgggcgcccgggag
gcggtcccggcggtgcgacgggaccgctggcggcggacgtcgggaatccacaaggtgcgc
gaccggcgcggcctggccgcggtccgcgagctgtggctgacccgcgatgtcatcgcccag
cggcgcgacgtcgccccccgccgcatcctgcccgattcggccatcatcgacgccgccctc
gccgatccgaaaacggcggaggaactggtcaagctgccggtgttcggcgggcgcaatcag
cgccgcagcgcgtcggtgtggctgggggcgctgcaggcggcccgggacagccgcaatcag
cccgaggacgccgaaccgttgaacgggccgccgccggcggcgcggtggagccggcgcaag
cccgaggccgccgcacggctggaggccgcccgggccgggctggcggaggtgtcgcagcgg
gtgggggtgccggccgagaacctgatctcccccgacctggtgcggcggttgtgctgggac
tgggaaccggccgcagacccggtcgccgccgtcgaggacttcctgcgcgccggtcaggcg
cgaccgtggcagcgcgaactcgtcgtcggcgcgctggccgaggcggtgcagccgcctacc
gacgcccgcgaccgcccggacgtggccggcacctga
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