Mycobacterium shigaense: MSG_02294 Help Entry MSG_02294         CDS       T05717                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism mshg  Mycobacterium shigaense Pathway mshg03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:mshg00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     MSG_02294  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mshg03400]     MSG_02294 Enzymes [BR:mshg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      MSG_02294 DNA repair and recombination proteins [BR:mshg03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      MSG_02294 SSDB OrthologParalogGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S MimR_N Motif Other DBs NCBI-ProteinID:  BAX92442 UniProt:  A0A1Z4EHM1 LinkDB All DBs Position complement(2432901..2433791) Genome browser AA seq 296 aa AA seqDB search MRGIDVEITHPDRVLFPKDGITKQDLVDYYAAAADAMLPQLRDRPISVQRFPRGIGEKGF VQQDFAEVLPDWMAGVEVTKEGGTLVHPLVECPEALRWLTNQGCITLHVWQSRRDRLHHP DRLVFDFDPPDRDFAVVRATARATAAVLDDLGLACYVQTTGSRGLHVVTPLRADTDFDTI RQFARDIAEVVVADDPGHRTLEARKGNRGGRVYLDIMRNAYAQTAVAPYSVRARARAPVA TPLEWDELDTRGLRPDRFTIRDIPKRLAEQRDPWREMYRHARSLNEPIKRIAKLRA NT seq 891 nt NT seq  +upstreamnt  +downstreamnt atgcgcggcatcgacgtcgagatcacgcatccggatcgggtgctgtttccgaaggatgga atcaccaagcaggacctcgtcgactactacgccgccgcggccgacgcgatgcttccccag ctgcgggaccgcccgatcagcgtacagcggtttccgcgtggcatcggcgaaaagggcttc gtgcaacaggatttcgcggaggtactgccggactggatggcgggcgtggaggtcaccaag gaaggcggcaccctggtgcatccgctggtcgaatgcccggaggcgctgcgctggctgacc aaccagggctgcataaccctgcacgtgtggcagtcgcggcgcgaccggctgcaccacccg gaccggctcgttttcgacttcgacccgcccgaccgcgatttcgcggtggtgcgtgcgacc gcccgcgcgacggcggcggtgctggacgatctgggactggcctgctatgtgcagacgacc ggctcgcggggactgcacgtcgtgacgccgctgcgcgccgacaccgatttcgacaccatc cgccaattcgctcgcgacatcgccgaagtcgtcgtggcagacgaccccggccaccgcacc ctcgaagcccgcaagggcaaccgcggcgggcgggtgtacctcgacatcatgcgaaacgcc tacgcccagacggcggtcgcgccgtattcggtgcgggcccgggcccgggcgccggtggcc accccgctggaatgggatgaattggacacgcgcggtctgcggccagaccgcttcacgatc cgcgacattcccaaacgcctggccgagcaacgcgatccgtggagggagatgtaccggcac gcccggtcactgaacgagccgatcaagcggatcgcgaagctgcgtgcctga

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