KEGG   Mycobacterium shigaense: MSG_02521
Entry
MSG_02521         CDS       T05717                                 
Name
(GenBank) Alternative sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
mshg  Mycobacterium shigaense
Brite
KEGG Orthology (KO) [BR:mshg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mshg03021]
    MSG_02521
Transcription machinery [BR:mshg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MSG_02521
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 MarR_2 HTH_23 HTH_Crp_2 HTH_3 KORA HTH_Tnp_ISL3 Sigma70_ECF MarR HTH_24 HTH_Tnp_4 DUF134 DUF7343 Flg_hook GerE HTH_31
Other DBs
NCBI-ProteinID: BAX92665
UniProt: A0A1Z4EI64
LinkDB
Position
complement(2682391..2683212)
AA seq 273 aa
MTDVLAPTRSPEPPKQPPKARSDDSYDDVVEMFLVLGMLPAESHEYRRQRERIVTRCLPL
ADHVARHFGRRGEGLDDLTQVARLGLMNAINRFDPDKGPSFIGFAIPTMMGEVRRYFRDY
SWSMRVPRRLRELHVQISRATADLAQRLGRAPTASELSQELGVSHEEVVECLVAGDAYQL
ESLDAPRGSDGSGNTRSVADAVGGIDPQIDHITNREAVRSLVSALPQREREVLHMRFFES
MTQSQIAARIGVSQMQVSRILASTLQSLRDRLD
NT seq 822 nt   +upstreamnt  +downstreamnt
atgaccgacgtccttgctccgacccgttcgccggagccgccgaagcagccgccgaaagcg
cggtccgacgactcctacgacgacgtggtcgagatgttcctcgtgctcggcatgctgccc
gcggaatcgcacgagtaccgccgccagcgtgaacgcatcgtgacgcgctgcctgccgttg
gccgaccatgtggcccgccatttcgggcggcgcggcgaggggctcgatgacctgactcag
gtcgcgcggctggggctgatgaacgccatcaaccgcttcgatccggacaagggtcccagc
ttcatcggcttcgcgattcccaccatgatgggcgaggtccgccgctattttcgcgactac
agctggagcatgcgggtgccgcggcggctgcgcgagctgcatgtccagatcagcagggcg
accgcggacctggcgcaacgactgggccgcgcccccaccgccagcgagctgtcgcaggag
ttgggcgtctcgcacgaggaggtcgtcgaatgcctggtggccggtgacgcctaccagctg
gagtccctggatgcccccagggggtccgacgggtccggcaatacccgctcggtcgccgat
gcggtgggaggcatcgatccgcagatcgaccacatcaccaatcgcgaggcggtacgttcg
ctggtcagtgcgctcccgcagcgggagcgggaggtgctgcacatgcgcttcttcgaatcg
atgacccaaagccagatcgccgcgcggatcggggtgtctcagatgcaggtgtcgcgcatc
ctggccagcaccctgcagagcttgcgcgaccggctggattag

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