KEGG   Mycobacterium shigaense: MSG_03333
Entry
MSG_03333         CDS       T05717                                 
Symbol
csd1
Name
(GenBank) putative cysteine desulfurase 1
  KO
K11717  cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Organism
mshg  Mycobacterium shigaense
Pathway
mshg00450  Selenocompound metabolism
mshg01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mshg00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    MSG_03333 (csd1)
Enzymes [BR:mshg01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     MSG_03333 (csd1)
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.16  selenocysteine lyase
     MSG_03333 (csd1)
SSDB
Motif
Pfam: Aminotran_5 Aminotran_1_2 Beta_elim_lyase Cys_Met_Meta_PP DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: BAX93469
UniProt: A0A1Z4EKG8
LinkDB
Position
complement(3527784..3529706)
AA seq 640 aa
MSTSEYRSVDAESDLPLNAAEIAALASQLYAASIRPGPDSPPQTAPVAPRGGVPDATAAT
SAGQTAVGSADLYSAPVPLLGVTDIYVPAPTSPEPEPPPHAVPVAPRGSVPDTTSGPSAA
EAAAGIGDPYLPPGIADLSAFAVPTQGIVSTTPGVLAGASSPAKPTAPAAPRGSAPYSGL
GWSPEAPPVVDLNWSDAPPAGPEALNGLAGEDYTYHFLTASDPVPQLTDDHEVFDVNAVR
EDFPILKETINGKPLIWFDNAATTQKPQSVIDRISYFYAHENSNIHRAAHELAARATDAY
EEARETVRRFIGAEKAEQNIFVRGTTEAINLVAYAWGGKHLGPGDEIVITHLEHHANIVP
WQLLSQRTGAVLKVAPVDEAGNLLLSEFEDLLGPKTKLVAATQVSNALGTVTPVEKIVQL
GHRYGARVLIDGAQSIPHLPIDVAELGVDFFVFSGHKIYGPTGIGVLYGSEEALAETPPW
QGGGNMIADVTLERSLYQGLPNKFEAGTGNIADAVGLGEALRYVERVGIERIAAYEHALL
DYATPRLADIPGVRLVGTADEKASVLSFVLAGHEPLEVGKALNAEGIAVRAGHHCAQPIL
RRYGLEATVRPSFAFYNTFDEIDVFLRAVRRIAEGGANVG
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgagtacaagtgagtaccggtcggtagacgccgaaagcgacctgcccttgaacgccgcg
gaaatcgcggcgctggccagccagctgtatgcggccagcatccggccgggtccggatagc
ccgccacagacggcacccgttgcgccgcgcggcggcgtgccggacgcgacggctgccacc
tcggctgggcagaccgctgtgggcagcgccgatctgtattcggcgcccgtcccgttgctc
ggtgtcaccgacatatacgtccccgctccgacatctccggaaccggaaccgccaccccac
gcggtgccggtcgctccccggggcagcgtgcccgacacgacgtccgggccgtcggcggcg
gaggcggccgccggcatcggcgacccctacctaccgccgggcatcgccgacctcagcgcg
ttcgcggtacccacccagggcatcgtttcgacgacgcctggcgtgctggccggggcctcg
agtccggccaagccgacggcaccggcggcgccacgtggttcggcgccgtattccgggctc
ggctggtcgcccgaggcgccgccggttgtcgacctcaactggtccgacgccccacccgca
ggtcccgaggcgctcaacggtctggccggtgaggactacacctaccacttcctgacggcg
tcggaccccgttccgcaattgaccgacgaccacgaggtgttcgacgtcaacgcggtgcgc
gaggacttcccgatcctcaaggagacgatcaacggaaagccgctgatctggttcgacaac
gcggcgaccacccagaagccgcagtcggtgatcgaccgcatctcgtacttctacgcacac
gagaactccaacatccaccgggcggcacacgagctggccgcgcgggccacggatgcctac
gaagaggcccgcgagaccgtgcggcggttcatcggtgccgagaaggcggagcagaacatc
ttcgtgcgcggcaccaccgaggccatcaacctggtggcctacgcgtggggcggcaagcac
ctgggcccgggcgacgagatcgtcatcacgcacctggagcatcacgccaatatcgttccg
tggcaactgctttcgcaacggaccggcgctgttctgaaggtcgcgccggttgacgaggcg
ggcaacctgttgctctcggagttcgaggacctcttgggcccgaagacgaaactggttgcg
gcgacgcaggtgtcgaatgcactgggcacggtgacgccggtggagaagatcgtccagctc
ggccaccggtacggcgcgcgggtgttgatcgatggtgcacagtcgattccgcacctgccg
atcgacgtcgccgaactgggcgtcgactttttcgtgttctccggccacaagatctacggc
cccaccggaatcggggtgctgtacgggtcggaggaggcgctcgccgagacgccaccgtgg
cagggcggcggcaacatgatcgccgatgtcacgctggaacggtcgctgtatcaggggctg
cccaacaagttcgaggccggcaccggcaacatcgccgacgccgtcgggctgggggaggcg
ctgcgctacgtcgaacgcgtgggcatcgaacgcattgcggcctacgagcacgcgctgctc
gactacgccactccgcgcctcgccgacatcccgggtgtccgcctggtcggtaccgcggat
gagaaggccagcgtgctgtccttcgtgctggccggccacgagccactcgaggtcggtaag
gccctcaacgccgaaggcattgcggtgcgcgccggacaccattgcgcgcagccgatcttg
cgccgctacggcctggaggcgaccgtgcgtccctcgttcgccttctacaacacgttcgat
gagatcgacgtgttcttgcgggcggtgcgtcggatcgccgagggcggcgccaacgtcggc
tga

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