Mycobacterium shigaense: MSG_03409
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Entry
MSG_03409 CDS
T05717
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mshg
Mycobacterium shigaense
Pathway
mshg03030
DNA replication
mshg03430
Mismatch repair
mshg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSG_03409
03430 Mismatch repair
MSG_03409
03440 Homologous recombination
MSG_03409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mshg03032
]
MSG_03409
03400 DNA repair and recombination proteins [BR:
mshg03400
]
MSG_03409
Enzymes [BR:
mshg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSG_03409
DNA replication proteins [BR:
mshg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSG_03409
DNA repair and recombination proteins [BR:
mshg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSG_03409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
AA_kinase
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BAX93544
UniProt:
A0A1Z4EKN3
LinkDB
All DBs
Position
complement(3617014..3617970)
Genome browser
AA seq
318 aa
AA seq
DB search
MHLVLGDEELLVERAVAAVLRSARERAGADADTIPVNRVRAGDVSTYELAELLSPSLFAD
ERIVVLEAAGEAGKEAAAMIAAACADIPPGTELVVVHSGGGRAKALAAELQSLGAVVHRC
ARITKLGERVDFIRKEFRALRVKADEQTVTALIDAVGSDVRELAAACSQLVADTGGEVNA
AAVRRYHSGKAEVKGFDIADKAVAGDVAGAAEALRWAMMRGEPLVVLADALAEAVHTIGR
VGPLSGDPYRLAGQLGMPPWRVQKAQKQARRWSRDSVAEAMKVVAALNADVKGAAADADY
ALESAVRQVAELVADGGR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttgcacctggtcctgggagacgaagagctgttggtcgagcgggcggtggccgcggtgctg
cggtcggcgcgcgagcgggcgggcgccgacgcggacacgatcccggtgaaccgcgtgcgg
gccggcgatgtcagcacctatgagctcgccgagctgctcagcccgtcgctgttcgccgac
gaacgcatcgtcgtgctcgaggcggccggcgaggcgggcaaggaagccgcggcgatgatc
gcggcggcctgcgccgacatcccgccgggcaccgagctggtcgtcgtgcactccggtggc
ggacgggccaaggcgctggccgccgagctgcaatcgctgggcgcggtcgtacatcggtgt
gcgcgcatcaccaagctcggcgaacgcgtcgacttcatccgcaaggagttccgtgcgctg
cgggtcaaggccgacgagcagacggtgacggccctgatcgacgccgtcggctccgatgtg
cgtgagctcgccgcggcgtgttcgcagttggtcgccgacaccggcggcgaggtgaacgcc
gccgcggtgcgccgctatcacagcggcaaggccgaggtgaagggctttgacatcgcggac
aaggccgtcgcgggcgatgtcgcgggagccgcggaggcgctgcggtgggcgatgatgcgc
ggcgagcccctcgtggtgctggcggatgccctcgccgaggccgtgcacaccatcgggcgg
gtcggtccgctgtccggcgacccctaccgcctggccggtcagctggggatgccgccgtgg
cgggtgcagaaggcgcagaaacaggcgcggcgctggtcgcgcgattcggtggccgaggcc
atgaaggtggtggcggcgctgaacgccgacgtcaagggtgccgctgcggacgccgactat
gcgctggaatcagcggtcaggcaggttgccgaattggtggccgacggcggccggtga
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