Mycobacterium shigaense: MSG_04062
Help
Entry
MSG_04062 CDS
T05717
Symbol
pepD
Name
(GenBank) serine protease PepD
KO
K08372
putative serine protease PepD [EC:3.4.21.-]
Organism
mshg
Mycobacterium shigaense
Pathway
mshg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MSG_04062 (pepD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mshg01002
]
MSG_04062 (pepD)
Peptidases and inhibitors [BR:
mshg01002
]
Serine peptidases
Family S1: chymotrypsin family
MSG_04062 (pepD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_2
PDZ
Peptidase_S46
PDZ_6
Motif
Other DBs
NCBI-ProteinID:
BAX94184
UniProt:
A0A1Z4EMF1
LinkDB
All DBs
Position
complement(4345725..4347206)
Genome browser
AA seq
493 aa
AA seq
DB search
MTNDPRYSPPPQQPGYRSAPNQPAPPAYSQGQQPYNQPFDWRYQPSQQPTQSARANQYRR
PYEPFGATGPVAGGTGAGPIPGATGAGPIPGGSGPVPLFPPPAPEKRSRAGLLVAGAVAI
AVVSAGIGGAAATVVELGTHVGSGSGGRVIGAAPSVPAANMPPGSVEQVASKVVPSVVML
ETDIGRASEEGSGVVLSADGLILTNNHVIAAAAPQKAPPPGGPGGAPGGPGGQGGPGGPA
PKTTVTFSDGRTAPFTVVGADPTSDIAVIKVQGVNGLNPISLGSSSDLKVGQPVVAIGSP
LGLSGTVTTGIISALNRPVSTTGESGNQNTVLDAIQTDAAINPGNSGGALVNMSGQLVGI
NSAIATLGADSPDAQSGSIGLGFAIPVDQAKRIADELISSGKASHASLGVQVTSDKSTPG
AKVVDVIQGGAAAGAGVPKNVVVTKVDDRPINSADALVAAVRSKAPGDKVSLTYVDPGGG
SRTVQVTLGKADQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgacccgaggtattcgccaccgccgcagcagccgggataccgcagtgcgcct
aaccagcctgcgccgcccgcctactcgcagggccaacagccatacaaccagccattcgac
tggcgctatcagccatcccagcaaccgacgcagtcggcgcgggcgaatcagtaccggcgg
ccctacgagccgttcggcgccaccggccccgtcgccgggggcaccggcgcgggtccgatc
cccggcgctaccggcgcgggcccgattcccggcggcagcggccccgtcccgctcttccct
ccgcccgcacccgaaaagcgttctcgcgcaggattattggtggcgggcgcggtagcgatc
gcggtggtttcggccggtatcggcggcgctgcggccacggtagtcgagctgggtacgcac
gtcggcagcggcagcggtggccgggtgatcggcgccgctcccagcgtcccggcggccaac
atgcccccgggcagcgtcgagcaggtcgcgtccaaggtggtgcccagcgtcgtcatgctg
gagaccgacatcggccgcgcctccgaagagggctccggggtcgtgctgtcggcagacggg
ctgattctgaccaacaaccacgtcatcgccgccgccgccccgcagaaagctccgccgccg
ggtggccccggcggtgctccgggcggaccgggtgggcagggcggccccggcggcccggca
ccgaaaacgacggtgaccttctccgacggccggaccgcgcccttcaccgtggtcggcgcc
gaccccaccagcgacatcgcggtgatcaaggtgcagggcgtcaacggcctgaaccccatc
tccctgggctcctcgtcggacctcaaggtcggccagccggtggtggcgatcggatcgccg
ctgggcttgtccggcacggtgaccaccggcatcatcagcgcactgaaccggccggtgtcc
accacgggtgagtcgggcaaccagaacacggtgctggacgcgattcagaccgacgccgcg
atcaacccgggtaactccgggggcgcgctggtcaacatgagcgggcagctggtgggcatc
aactcggcgatcgccacgttgggcgcggactcgcccgacgcccagagcggttccatcggt
ttgggtttcgcgattccggtcgaccaggccaagcgcatcgccgacgaactgatcagcagc
ggcaaggcgtcgcacgcctcgctgggcgtgcaggtcaccagtgacaagagcaccccgggg
gccaaggtcgtcgacgtcatccagggcggcgcggccgcgggcgccggcgtgcccaaaaac
gtcgtcgtcaccaaggtcgacgaccgcccgatcaacagcgccgacgcgttggtggccgcc
gtgcggtccaaggctcccggcgacaaggtgtcgttgacctacgtcgatcccgggggcggc
agccgcaccgtgcaggtcaccctgggtaaggcggatcagtga
DBGET
integrated database retrieval system