Mycobacterium shigaense: MSG_04089
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Entry
MSG_04089 CDS
T05717
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mshg
Mycobacterium shigaense
Pathway
mshg03420
Nucleotide excision repair
mshg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSG_04089 (uvrD1)
03430 Mismatch repair
MSG_04089 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mshg03400
]
MSG_04089 (uvrD1)
Enzymes [BR:
mshg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSG_04089 (uvrD1)
DNA repair and recombination proteins [BR:
mshg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSG_04089 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
MSG_04089 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BAX94211
UniProt:
A0A1Z4EMQ1
LinkDB
All DBs
Position
complement(4377244..4379619)
Genome browser
AA seq
791 aa
AA seq
DB search
MTVHATDAKPASEAEQLLDGLNPQQRQAVVHEGPPLLIVAGAGSGKTAVLTRRIAYLIAA
RGVGVGQILAITFTNKAAAEMRERVVRLVGNRARAMWVSTFHSTCVRILRNQASLIKGLN
SNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELVDPDQALANLSDESD
DLAHTVASVYAEYQRRLRAANALDFDDLIGETVAVLQGFPQIAQYYRRRFRHVLVDEYQD
TNHAQYVLVRELVGGDAKLGPPNQPGSAENSGPSADAVPPAELCVVGDADQSIYAFRGAT
IRNIEDFERDYPDATTILLEQNYRSTQNILSAANSVIARNSGRREKRLWTDAGEGELIVG
YVADNEHDEARFVAQEIDALAEQGEITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGG
VRFYERKEIRDIVAYLRVLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGASFAD
ALVAAAEGKVPMLNTRAEKAISGFVALLDELRGRLDDDLDDLVESVLERTGYRAELEAST
DPQELARLDNLNELVSFAHEFSIDQANAAALGEASEDGLDEDVPDTGVLAAFLERVSLVA
DTDEIPDNTAGVVTLMTLHTAKGLEFPVVFVTGWEDGMFPHMRALDDPTELSEERRLAYV
GITRARQRLYLTRAIVRSSWGQPMLNPESRFLQEIPQELIDWRRTAPAPSFSAPVSGAGR
FGTPRVAPTRSGVGKRPLVVLQPGDRVTHDKYGLGRVEEVSGVGESAMSLIDFGSSGRVK
LMHNHAPLSKL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgcacgcaaccgatgccaagcccgcgtccgaggccgagcagctgctcgacgga
ctgaacccgcagcagcgccaggcggtggtgcacgaaggaccgccgctgctgatcgtggcc
ggggccggctcgggcaagaccgcggtcttgacccggcgcatcgcctatctgattgccgcg
cgcggcgtgggggtgggccagattctggccatcaccttcaccaacaaggccgccgccgaa
atgcgcgaacgggtggtgcggctggtcggcaatcgcgcccgcgcgatgtgggtgtcgacg
tttcactccacctgtgtgcgcattctgcgcaaccaggcttcgctgatcaaaggcctcaat
tccaatttctcgatctatgacgccgacgattcgcgccgcctgctgcagatgatcggccgc
gacatgggactggatatcaagcgctactcgccgcgcctgctggccaacgccatctccaac
ctgaaaaacgaattggtcgaccccgatcaggccctggccaatctgtccgacgaatccgac
gatctggcccacacggtggcaagcgtgtacgccgaataccagcggcggttgcgggcggcc
aacgcgctggacttcgacgacctcatcggcgaaaccgtggcggtgttgcagggcttcccg
cagatcgcccagtactaccggcggcggttccggcacgtcttggtcgacgagtatcaggac
accaaccacgcccagtacgtgctggttcgcgaactggtcggaggcgacgccaagctggga
ccgccgaatcagcccggttccgccgagaattctggcccgtcggccgatgccgtgccgccg
gccgaactgtgtgtggtcggcgatgccgaccagtcgatctacgccttccgcggcgccacc
atccgcaatatcgaggacttcgaacgcgactacccggacgcgacaacgattctgctggaa
cagaattaccggtctacgcagaacattctgtcggcggccaactcggtgatcgcccgcaac
tccggccgccgcgagaagcgcctgtggaccgacgccggcgagggcgagttgatcgttggc
tacgtcgccgacaacgagcacgacgaggccaggttcgtcgcccaggagatcgacgcgctc
gccgagcaaggcgagatcacctacaacgacgtggccgtgttctaccgcaccaacaactcg
tcgcggtcgttggaggaggtcttcatccgcgccggcataccgtacaaagtcgttgggggg
gttcgcttttacgagcgcaaggagatccgcgacatcgtcgcctacctgcgcgtgctggac
aaccccggtgacgcggtcagcatgcggcgcatcctcaacacgccgcgccggggtatcggc
gatcgggccgaggcctgcgtcgcggtgtacgccgagaacaccggcgccagctttgccgac
gcgctcgtcgccgctgccgaaggcaaggtgccgatgctgaatacccgcgcggagaaagcg
atttcgggattcgtcgcgctgctcgacgagctgcgcggccgcctcgacgacgacctcgac
gatctggtcgagtcggtgctcgagcgcaccggctaccgtgcggaactagaggcctccacc
gatccgcaggaactggcccgactggacaacctcaacgaactcgtcagcttcgcacacgaa
ttcagcatcgatcaggccaacgctgccgcgttgggcgaggcgtcggaagacggtctcgac
gaggatgtgccggataccggtgtgctggcggcctttctggagcgcgtgtcgctggtggcc
gacaccgacgagattcccgacaacaccgccggtgtggtcacgctgatgaccttgcacacc
gccaaggggctggagttcccggtggtgttcgtcaccggctgggaggacgggatgttcccg
cacatgcgggccctcgacgatcccaccgagctgtccgaggagcggcggctggcctatgtc
ggcatcacccgggcccgccagcggctctacctgaccagggcgatcgtgcggtcatcctgg
gggcaaccgatgctcaacccggaatcgcgcttcctgcaagagattccgcaggaacttatc
gactggcggcgcaccgcgcccgcgccgtcgttcagtgcgccggtcagcggcgccgggcgg
ttcggcacgccgcgcgtcgcgccgacccgctccggggtgggcaaacggccgctggtggtt
ttgcaacccggcgatcgggtgacgcacgacaagtacgggctgggccgggtcgaggaagtc
tccggtgtcggcgaatcggcgatgtcgttgatcgacttcggcagttcggggcgggtcaag
ctgatgcacaaccacgctccgctgagcaagctctag
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