Mycobacterium shigaense: MSG_04635
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Entry
MSG_04635 CDS
T05717
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mshg
Mycobacterium shigaense
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mshg03032
]
MSG_04635 (topA)
03400 DNA repair and recombination proteins [BR:
mshg03400
]
MSG_04635 (topA)
Enzymes [BR:
mshg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSG_04635 (topA)
DNA replication proteins [BR:
mshg03032
]
Prokaryotic type
DNA Topoisomerases
MSG_04635 (topA)
DNA repair and recombination proteins [BR:
mshg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSG_04635 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BAX94748
UniProt:
A0A1Z4EP71
LinkDB
All DBs
Position
complement(4887342..4890125)
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AA seq
927 aa
AA seq
DB search
MIVESPTKARKLAGYLGSRYIVESSRGHIRDLPRAAADVPAKFKSEPWARLGVNVDADFE
PLYIISPEKKSTVTELKGLLKDVDELYLATDGDREGEAIAWHLMETLKPRIPVKRMVFHE
ITEPAILEAAENPRDLDIDLVDAQETRRILDRLYGYEVSPVLWKKVAPRLSAGRVQSVAT
RIIVQRERDRMAFRSASYWDIIAQLDASVSDAAAAPPTFTARLTGVDGLRVASGRDFDSL
GVLRNRGGEAGAEVIVLDEADATSLAAGLRGTQLSVSSVEEKPYTRRPYAPFMTSTLQQE
AGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSASAIDAARTQARQLYGEEYVSPSP
RQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGDEFRLYELIWQRTVASQMADARGT
TLSLRINGTAGGPAGERPVVFSASGRTITFAGFLKAYVETVDELAGGEADDAERRLPRLT
EGQRLDALELTPDGHATNPPARYTEASLVKALEELGIGRPSTYSSIIKTIQDRGYVHKKG
SALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDAIASGNERRTNWLNNFYFGGDHG
VQDSVARAGGLKKLVGVNLEGIDAREVNSIKLFDDAEGRTIYVRVGKNGPYLERTITGED
GEPKPQRANLNDSLTPDELTLEVAEELFATPQEGRSLGVDPQTGHEIVAKDGRYGPYVTE
VLPKPDDDGDAAPAKKGKKPTGPKPRTGSLLRTMDLQTVTLEDALKLLSLPRVVGVDPAS
GDEITAQNGRYGPYLKRGTDSRSLTSEEQLFTITLDEALQIYAQPKRSGRQSASAPPLRE
LGTDPVSGKPMVVKDGRFGPYVTDGETNASLRKGDDVMSITDARASELLADRRARGPAKR
PARKTTRKAVAKTGAKTGAAKKAAKRN
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtcgagtcgccgaccaaggcgcgcaaactggccggttacctgggctccaggtac
atcgtcgaatcctcgcgcggccacatccgcgacctgccgcgcgccgctgccgacgtgccc
gcgaagttcaagtccgaaccctgggcgcggctcggggtcaacgtcgacgccgacttcgaa
ccgctctacatcatcagcccggagaagaagagcacggtcaccgagctcaagggactgctc
aaggacgtcgacgagctctacctggccacggatggtgaccgcgagggcgaggccatcgcc
tggcacctgatggagaccctcaagccgcgcatcccggtcaagcggatggtgttccacgag
atcaccgagccggccatcctggaggccgccgaaaacccccgtgacctggacatcgacttg
gtcgacgcccaggaaacccggcgcatcctggaccggctgtacggctacgaggtcagcccc
gtgctgtggaagaaggtcgcgccccggctgtcggcgggccgggtccagtccgtggccacc
cgcatcatcgtgcagcgcgaacgcgaccgcatggccttccgcagcgcgtcctactgggac
atcatcgcccagctggacgccagcgtgtccgacgcggccgccgcgccgcccaccttcacc
gcccggctgacgggcgtcgacggcctgcgcgtggccagcgggcgcgacttcgactcgctg
ggcgtgctgcgtaaccggggcggggaggccggcgcggaagtgatcgtgctggacgaggcc
gacgcgacatcgctggccgccggcctgcgtggcacccagctgtcggtgtcctcggtggag
gaaaagccgtacacgcggcggccctacgcgccgttcatgacgtccacgctgcagcaggag
gccggccgcaagctgcggttctcctcggagcggacgatgagcatcgcccagcgcctgtac
gaaaacggctacatcacctatatgcgtaccgactcgacgacgttgtccgcctcggcgatc
gacgccgctcgcacgcaggcccggcagctctacggcgaggagtacgtctccccgtcgccg
cggcagtacacccgcaaggtcaagaacgcgcaggaggcccacgaggcgatccggccggcc
ggtgagacgttcgccaccccggacgcggtgcgccgcgagctcgacggcgacgaattccgg
ctctacgagctgatctggcagcgcacggtggcctcgcagatggccgacgcccgcgggacc
acgctgagcctgcggatcaacgggactgcgggtggtcccgccggggaaaggccggtcgtc
ttctcggccagcggccgcaccatcaccttcgccggcttcctgaaggcctacgtcgagacc
gtggacgagctcgccggcggcgaggccgacgacgccgagcgccgcctgccccggctcacc
gagggccagcggctggacgccctggaactcacgcccgacggccacgccaccaacccgccg
gcgcgctacactgaggcgtcgctggtgaaggctctcgaagagctgggcatcgggcgcccg
tcgacgtactcgtcgatcatcaagacaattcaggaccgcggctatgtgcacaagaagggc
agcgccctggttccctcgtgggtcgcattcgccgtaaccggtttgctggaacagcatttc
ggccgcctggtcgactacgacttcaccgcggcaatggaggacgagctcgacgccatcgcg
tcgggcaacgagcgacgcaccaactggctcaacaacttctacttcggtggcgaccacggc
gtgcaggactcggtggcccgcgccggcggcctcaagaaactggtcggcgtcaacctcgag
ggcattgacgcacgagaagtcaactccatcaagctctttgacgatgccgagggccgcacc
atctacgtgcgggtgggcaagaacgggccctacctggagcgcacgatcaccggtgaggac
ggtgagccgaagccgcagcgtgccaacctcaacgactcgctgactccagacgagctcact
ctcgaggtggccgaggagctgttcgccaccccgcaggaggggcgctcgctgggcgtcgat
ccgcagaccggtcacgaaatcgtcgccaaggacggacgttacgggccgtacgtgaccgag
gtcctgcccaagcccgacgatgacggtgacgcggcgccggccaagaagggtaagaagccc
accggccccaagccccgaacggggtccctgctgcgcacgatggacctgcagaccgtcacg
ctcgaggatgcgctgaagctgttgtcgctgccccgcgttgtcggtgtggacccggcatcg
ggtgatgaaatcaccgcgcagaacggccgctatggcccatacctgaagcgcggcaccgac
tctcgatcgctgaccagtgaagagcagctgttcactatcacgctcgacgaggcgctgcag
atctacgcccaaccgaaacgctctgggcggcaaagtgcttcggctcccccgctgcgcgag
ttgggtaccgatccggtgtcgggcaagccaatggtggtcaaggatgggcgatttgggccc
tacgtcaccgacggcgaaacgaacgcgagcctgcgcaaaggcgacgacgtgatgtcgatc
accgacgcgcgcgcttccgagctgctggcggatcgacgcgcccgcggtccggcgaaacgc
ccggcccgcaagacgactcgcaaggctgtggccaaaacaggggccaaaacaggggccgcc
aaaaaggccgccaagcgcaattag
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