Mycobacterium shinjukuense: MSHI_01380
Help
Entry
MSHI_01380 CDS
T07415
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mshj
Mycobacterium shinjukuense
Pathway
mshj03420
Nucleotide excision repair
mshj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mshj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSHI_01380 (uvrD1)
03430 Mismatch repair
MSHI_01380 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mshj03400
]
MSHI_01380 (uvrD1)
Enzymes [BR:
mshj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSHI_01380 (uvrD1)
DNA repair and recombination proteins [BR:
mshj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSHI_01380 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
MSHI_01380 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBX72232
UniProt:
A0A7I7MK39
LinkDB
All DBs
Position
157144..159453
Genome browser
AA seq
769 aa
AA seq
DB search
MCVHATDATPEADRLLAGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLIAARG
VGVGQILAITFTNKAAAEMRERVVRLVGDRARYMWVSTFHSSCVRILRNQASLIEGLNSN
FSIYDADDSRRLLQMIGRDMGLDVKRYSPRLLAHAISNLKNELKDPHKAAADLTDDSDDL
ARTVASVYGEYQRRLRAANALDFDDLIGETVAVLQNFPQIAQYYRRRFRHVLVDEYQDTN
HAQYVLVRELVGRGSDDGVPPAELCVVGDADQAIYAFRGATIRNIEDFERDYPDATTILL
EQNYRSTQNILSAANSVIARNSGRREKRLWTDAGAGELIVGYVADNEHDEARFVAEEIDA
LAARGEITYHDVAVFYRTNNSSRSLEEVFVRAGIPYKVVGGVRFYERKEIRDIIAYLRVL
DNPGDAVSLRRILNTPRRGIGDRAEACVAVYAENTGASFVDALGAAADGKVPMLNSRAEK
AIAGFLELLDELRGRLDDDLGELVEAVLERSGYRRELESSTDPQELARLDNLNELVSVAH
EFSIDQALHASEAAALAPDEEDVPDTGVLAAFLERVSLISDADELPEHGAGVVTLMTLHT
AKGLEFPVVFVTGWEDGMFPHMRALGDPKELSEERRLAYVGITRARHRLYVSRAIVRSSW
GQPMLNPESRFLREIPQQLIDWRRTAPTPSFSAPVTGRFGASRSAPTRSGPSKRPLLVLQ
PGDRVTHDKYGLGRVEEVSGVGESAMSLIDFGSSGRVKLMHNHAPVTKL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgcacgcgaccgacgcaacgcccgaggcggatcgactgctggccggccttaac
ccgcaacagcgccaggcggtggtgcatgagggttctccgctgttgatcgtcgcgggcgcc
ggctcgggcaagaccgcggtgttgacccggcggatcgcgtacctgatcgcggcgcgcggt
gtgggggtcggtcagattctggccatcaccttcaccaacaaggccgccgcggagatgcgc
gagcgggtggtgcggctggtcggcgaccgggcccggtacatgtgggtgtcgacgtttcac
tccagctgtgtgcgcatcctgcgcaatcaggcgtcgttgattgagggtctcaactccaac
ttttccatctatgacgccgacgattcgcggcggctgctgcagatgatcggccgggatatg
ggcctggacgtcaagcggtactcgccgcggctgttggcccacgccatctccaacctgaag
aacgagttgaaggacccgcacaaggcggcggccgacctcaccgatgactccgatgacctg
gcgcgcaccgtggcgtcggtgtatggcgaataccagcggcgcctacgggcggccaacgcg
ctggacttcgacgacctgatcggggagacggtggcggtgctgcagaacttcccgcagatc
gcccagtactaccggcggcggttccggcatgtgctggtcgacgaataccaggacaccaac
cacgctcaatacgtgctggtccgcgagttggtgggacgcggcagcgacgacggcgtcccg
cccgccgagttgtgtgtcgtcggcgatgccgaccaggcgatctatgcgttccggggcgcc
accatccgcaacatcgaagacttcgagcgtgactaccccgacgccacaacgattctgctg
gaacagaattaccgctccacacagaacatcttgtcggcggccaactcggtgatcgcccgt
aactccgggcgccgcgaaaaacggctgtggaccgacgccggcgccggggagctgatcgtc
ggctatgtcgccgacaacgagcacgacgaggccaggttcgtggccgaggagatcgacgcg
ctggccgcgcgcggcgagatcacctaccacgacgtggccgtcttctaccgtaccaacaac
tcgtcacggtctttggaagaggtgttcgtccgggccgggattccgtacaaagtcgttggg
ggagtgcgcttttacgagcgcaaggagatccgcgacatcatcgcctacctgcgtgtgctg
gacaacccgggcgacgcggtcagcctgcggcgcatcctcaacacgccgcgccgcggcatc
ggcgatcgagccgaggcgtgtgtggcggtatacgccgagaacaccggcgccagcttcgtc
gacgcactcggcgccgccgccgatggcaaggtgccaatgctcaattcccgcgcggagaaa
gccatcgcgggcttccttgagttgctcgacgagctgcgcggccgcctcgatgacgacctc
ggagagctggtcgaggcggtgctggaacgcagcggctatcgccgggagctggaatcgtcc
accgacccgcaggagctggcccggctggacaaccttaacgaactcgtcagcgtcgcacac
gaattcagcatcgaccaggcccttcatgccagcgaagccgccgcgctcgcgccggatgag
gaagatgtgccggacaccggtgtgctggcggcgtttctggagcgggtgtcgctgatctcc
gacgccgacgaactccccgagcacggtgccggcgtggtcacgttgatgaccttgcacacc
gccaaggggttggagttcccggtggtcttcgtgaccggctgggaggacgggatgttcccg
cacatgcgggcgctgggcgatcccaaggaactgtccgaggaacggcggctggcctacgtc
ggcatcacccgggcccggcaccggctgtatgtgagccgggcgatcgtccgttcgtcttgg
gggcagccgatgctcaatccggagtcgcggttcctgcgcgagatcccgcagcagctgatc
gattggcggcgcaccgcgcccacgccgtcgttcagcgcgccggtaaccggacgctttggt
gcctcgcgctcagcgccgacccggtcgggcccgagcaagcgcccgctgctggtcttgcag
cccggcgaccgggtcacgcacgacaagtacggcctgggccgcgtcgaagaagtttccggg
gtcggcgaatcggcgatgtcgctgatcgacttcggcagctcggggcgggtgaagctgatg
cacaaccacgctccggtcaccaagctgtag
DBGET
integrated database retrieval system
