Mycobacterium shinjukuense: MSHI_05180
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Entry
MSHI_05180 CDS
T07415
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mshj
Mycobacterium shinjukuense
Pathway
mshj00300
Lysine biosynthesis
mshj00470
D-Amino acid metabolism
mshj01100
Metabolic pathways
mshj01110
Biosynthesis of secondary metabolites
mshj01120
Microbial metabolism in diverse environments
mshj01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
mshj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MSHI_05180 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MSHI_05180 (lysA)
Enzymes [BR:
mshj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MSHI_05180 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBX72612
UniProt:
A0A7I7ML89
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All DBs
Position
562482..563900
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AA seq
472 aa
AA seq
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MNVHPAGPRHAEETRLATGPPRPRSTDELLWLAPNVWPRNTTRDQTGVVRIAGIALTELA
QRYGTPLFVIDEDDFRSRCKETAAAFGGGANVHYAAKAFLCSEIARWIDEEGLSLDVCTG
GELAVALHANFPPERITLHGNNKSVAELTAAVKAGVGQIVVDSMTEIERLDAIAGEAGIV
ADVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVLATDHLRLVGLHSHIG
SQIFDVDGFELAAHRVIGLLRDIVREFGPTKTAQLSTVDLGGGLGIAYLPADDPPPIGEL
AAKLSAIVSNESKAVGLPAPRLVVEPGRAIAGPGTVTLYRVGTVKDVDISTTAYRRYVSV
DGGMSDNIRTALYDAQYDVRLVSRASAAPAAPARLVGKHCESGDIIVRDTWVPDDIQPGD
LVAVAATGAYCYSLSSRYNMVGRPAVVAVRARNARLLLRRETVEDLLSLEVR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtccatcccgccggcccccggcacgccgaagagacccgactcgcaaccggcccg
ccgcgcccccggtcaaccgatgagttgctgtggctggcgccgaatgtctggccgcgcaac
accacccgcgaccagaccggggtggtccgcatcgccgggatcgcactgaccgagctcgcc
cagcggtacgggaccccactcttcgtcatcgacgaggacgacttccgctcgcggtgcaag
gagaccgccgcggcgttcggcggcggggccaatgtgcactacgccgccaaggcgttcctg
tgcagcgaaatagcgcgatggatcgacgaagaaggcctgtcgctcgacgtgtgcaccggc
ggggaactggccgtggcactccacgccaactttcccccagagcggatcaccctgcacggc
aacaacaaatcggtcgcggagctgaccgccgcggtgaaagccggtgtcggccaaatcgtt
gtggactcgatgaccgaaatcgagcggctggacgccatcgccggcgaggccggcatcgtc
gcggacgtcctcgttcgtctcaccgtcggcgtcgaggcgcacacccacgagttcatctcc
accgcacacgaagaccagaagttcgggctgtcggtggccagcggggcggcgatggcggcg
gtgcgccgggtattggccaccgaccatctgcggctggtcgggctgcacagccacatcggt
tcgcagatcttcgatgtggacggcttcgagctggccgcacaccgggtcatcggcctgctg
cgcgacatagtccgcgagttcggtcccacgaaaacggcacagctgtcgaccgtcgatctg
ggcggcggtctgggcattgcgtacctgccggccgacgacccgccaccgatcggcgagctg
gcggccaagctgagcgccatcgtgagcaacgagtcgaaggccgtcggcctacccgcgccc
aggctggtggtcgagcccggacgcgccatcgccgggccgggcaccgtcacgctgtatcgg
gtgggcaccgtcaaggacgtcgacatcagcaccaccgcgtaccggcgttatgtcagcgtc
gacggtggcatgagcgacaacatccgcaccgcgctctatgacgcccagtatgacgttcgg
ttggtttcgcgggccagtgcggcgccggcggcgccggcccgtctcgtcggaaagcactgc
gaaagcggcgatatcatcgtgcgcgatacctgggtgcccgacgatatccagcccggagat
ctggtggcggtggccgccacgggcgcctactgctattcgctgtcgagtcggtacaacatg
gtcggccgtcccgccgtggtggcggtgcgcgcgcggaatgcgcgcctgctcctgcgtcgg
gagacggtcgaggatctgctgagtctggaggtgaggtga
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