Mycobacterium shinjukuense: MSHI_10820
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Entry
MSHI_10820 CDS
T07415
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mshj
Mycobacterium shinjukuense
Pathway
mshj03030
DNA replication
mshj03430
Mismatch repair
mshj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mshj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSHI_10820
03430 Mismatch repair
MSHI_10820
03440 Homologous recombination
MSHI_10820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mshj03032
]
MSHI_10820
03400 DNA repair and recombination proteins [BR:
mshj03400
]
MSHI_10820
Enzymes [BR:
mshj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSHI_10820
DNA replication proteins [BR:
mshj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSHI_10820
DNA repair and recombination proteins [BR:
mshj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSHI_10820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
Motif
Other DBs
NCBI-ProteinID:
BBX73176
UniProt:
A0A7I7MLX7
LinkDB
All DBs
Position
complement(1234096..1236054)
Genome browser
AA seq
652 aa
AA seq
DB search
MPNVAAMGATGATQLSFAELAEARSAAWDPADEIPLRETTFVVVDLETTGGRARGSTATP
PDAITEIGAVKVRGGAVLGEFATLVDPQRAIPAPVVQLTGITTSMVRDAPTIDAVLPMFF
EFAGGAVLVAHNARFDIGFLRAAAQHCGIPWPRPTVLCTVRLARRVLSREEAPSVRLAAL
ARLFALAGQPTHRALDDARATVDVLHALIERVGNQGVHTLADLRGYRSEVTAAQRRKRVL
ADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVGQYFTGADPRGRMREMVALADAVDHVE
CAHPLEAGVRELRMLAAHAPPYNRRSRFPHRWWWVQLTEEAFPRLAVVRAPRHDRVVGPF
RSRADAAETADLLARFSGLRTCTQRLARSALHGPACPESDVAPCPAGRNVTAERYAEATK
RAADLIDGRDDDALAAAVDQITALAERRRYESAARLRDRVAAAVEALWRAQRLRALAAVA
ELIAAAPDGPNAQGGWQLVVIRHGRLAAAGNAPRGVPPMPVVEAIRAGAQAVLPAAGPLG
GALVEETALIARWLAAPGVRLVRVTGASGAEADAGWASPVRSAGAWARWAASARSARLAA
EQTGAGCHRWRSDLLAEPHPPREQLFGRPAVDRGAGPAQAVLPGRQPLSAAG
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacgtcgcggccatgggtgcaaccggcgcgactcagctgagcttcgccgagctg
gcggaggcccggtcggcggcctgggatcccgccgacgagatcccgttgcgcgagaccacg
ttcgtggtggtcgacctggaaaccaccggtggacgcgcgaggggcagcacggcaactccc
cccgacgccatcaccgagatcggggcggtcaaggtgcgcggcggcgccgttctcggtgaa
ttcgccaccctggtcgacccgcagcgcgccatccccgccccggtggtgcagctgaccggc
atcaccacgtcgatggtgcgtgacgccccgaccatcgacgcggtgctgccgatgtttttc
gagttcgccggtggcgcggtgctcgtcgcccacaacgccaggttcgacatcgggttcctg
cgtgccgcggcgcagcactgcggtatcccatggccgcggcccacggtgctgtgcacggtc
cgattggcgcggcgggtgctcagccgagaggaggcccccagcgtgcggctggccgcgttg
gcacgcctgttcgccctcgccggccagcccacccaccgtgccctcgacgatgcccgcgcc
accgtcgacgtgctgcacgccctgatcgagcgggtgggcaaccagggcgtgcacaccctg
gccgatctgcgcgggtatcggtccgaggtcaccgcggcgcagcgccgcaagcgggtgctg
gccgacggcctgccgcaccggccggggatctacctcttccgcggaccctcgggtgaggtg
ctctacgtgggcaccgcggtcgacctgcggcgccgggtcggccagtacttcaccggggcc
gacccgcgtggccggatgagggagatggtcgccctggccgatgcggtcgaccacgtcgag
tgcgcgcatcccctggaagccggcgtccgtgagctgcggatgctggccgcgcacgccccg
ccgtacaaccgccggtcgaggttcccgcaccggtggtggtgggtgcagctcaccgaggaa
gcgttcccccggctggcggtggtccgtgccccgcgacacgaccgcgtcgtcggccctttt
cggtcccgcgcggacgcggccgaaacggcggacctgctggcccggttcagcgggctccga
acttgcacccagcggctggcacgctcggccctgcacgggccggcgtgccccgagtcggac
gtggcgccctgccccgccggccgtaacgtcaccgccgagcggtacgccgaggccaccaag
cgcgcggccgacttgatcgacgggcgcgacgacgacgcgctggccgcggccgtggaccag
atcaccgcgctcgccgaacgccggcgctacgagagcgccgcacgactgcgtgaccgggtc
gccgccgccgtcgaggcgctgtggcgtgcccagcggttgcgtgcgctggccgccgtggcc
gagctgatcgccgccgcgcccgacggccccaatgcccagggcggctggcagctcgtggtc
atccgccacggccggctcgccgcggccggtaacgccccacggggggtgccgcccatgccg
gtggtcgaggccatccgggccggcgcacaggcggtgctgccggcggctggtccactcggt
ggcgcgctggtcgaggagaccgcgctgatcgcccggtggctggccgcgccgggggtgcgc
ctggtgcgggtcaccggcgccagtggtgccgaagccgacgcggggtgggcctcgcccgtg
cgctcggcgggggcctgggcgcggtgggcggcgtcggcgcggtcggcgcggctggccgcc
gaacagaccggggcgggctgccatcgctggcgctcagacctgctggctgaaccgcaccca
ccgcgcgagcagctgttcggccgccccgctgtcgatcgcggcgccggcccggcgcaagcc
gtcctcccaggccggcagccactcagcgcggctggatag
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