Mycobacterium shinjukuense: MSHI_16450
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Entry
MSHI_16450 CDS
T07415
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mshj
Mycobacterium shinjukuense
Pathway
mshj03030
DNA replication
mshj03430
Mismatch repair
mshj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mshj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSHI_16450 (dnaE1)
03430 Mismatch repair
MSHI_16450 (dnaE1)
03440 Homologous recombination
MSHI_16450 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mshj03032
]
MSHI_16450 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mshj03400
]
MSHI_16450 (dnaE1)
Enzymes [BR:
mshj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSHI_16450 (dnaE1)
DNA replication proteins [BR:
mshj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSHI_16450 (dnaE1)
DNA repair and recombination proteins [BR:
mshj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSHI_16450 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBX73739
UniProt:
A0A7I7MR58
LinkDB
All DBs
Position
complement(1833598..1837113)
Genome browser
AA seq
1171 aa
AA seq
DB search
MHLHNHTEYSMLDGAAKITPMLAEVERLGMTAVGMTDHGNMFGASEFYNSATKAGIKPII
GVEAYVAPGSRFDTRRISWGDPSQKGDDVSGGGAYTHLTMMAENATGLRNLFKLSSLASF
EGQLSKWSRMDAELIAEHADGIIITTGCPSGEVQTRLRLGQHREALEAAAKWREIVGPDN
YFLELMDHGLTIERRVREGLLEIGRTLGIPPLATNDCHYVTRDAAHNHEALLCVQTGKTL
SDPNRFKFDGDGYYLKSAAEMREIWDDEVPGACDATLLIAERVQSYAEVWTPRNRMPVFP
VPAGHDQGSWLRREVDAGLARRFPDGPPQNYLARAAYEIDVICAKGFPSYFLIVADLINH
ARSVGIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMPDIDIDFDDRR
RGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKALPPAIM
AKDIPLSGITDPAHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHACAVIMS
SEPLTEAIPLWKRPQDGAIITGWDYPACEAIGLLKMDFLGLRNLTIIGDAIDNIKANRGI
DLDLESVPLDDKPTYDLLGRGDTLGVFQLDGGPMRDLLRRMQPTGFQDVVAVIALYRPGP
MGQNAHNDYADRKNGRQEIRPIHPELAEPLEEILAETYGLIVYQEQIMRIAQKVAGYSLA
RADILRKAMGKKKREVLDKEYEGFADGMKANGFSAGAIKALWDTVLPFADYAFNKSHAAG
YGMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNESGLNF
ASVGTDIRYGLGAVRNVGANVVASLINTRSDKGKFTDFSDYLNKIDISACNKKVTESLIK
AGAFDSLGHARKGLFLVHSDAVDSVLGTKKAEAMGQFDLFGGTDAGTDAVFTIKVPDDEW
EDKHKLALEREMLGLYVSGHPLNRVAHLLSTQVDTAIPAVLDGDVPNDAQVRVGGILASV
NRRVNKNGMPWASAQLEDLTGSIEVMFFPHTYSSYGADIADDAVVLINAKVAIRDDRIAL
IANDLVVPDFSNAAADRPLAVSLPTRQCTFDKVSALKQVLARHPGTSQVHLRLISGDRIT
TLQLDQSLRVTPSPALMGDLKELLGPGCLGG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctgcacaaccacaccgagtattcgatgttggacggtgccgcgaagatcactccc
atgttggccgaggtggagcggctgggaatgaccgcggtggggatgacggatcacggaaac
atgttcggcgccagcgagttctacaactcggcgaccaaggcgggaatcaagccgatcatc
ggcgtggaggcgtatgtcgcgcccggctcacgctttgacacccggcgcatttcctggggc
gaccccagtcagaagggcgacgacgtctcgggcggcggggcctacacacacctgacgatg
atggccgagaacgcgacgggtctgcgcaacctgttcaagctgtcctcgctggcttcgttt
gagggccagctgagcaagtggtcgcgcatggatgccgagctcatcgccgaacacgccgat
gggatcatcatcaccaccggctgcccgtccggggaggtgcagacccgcctcaggcttggc
cagcaccgggaggcgctggaggcggccgccaagtggcgcgagatcgtgggtccggacaac
tacttcctagagctgatggatcacgggctgaccatcgaacgccgcgttcgtgagggcctg
ctcgagatcggtcgcacgctgggcattccgccgctggccaccaacgactgccattacgtc
acccgcgacgccgcccacaaccacgaggcgctgttgtgcgtgcagaccggcaagaccctg
tccgatcccaaccggttcaagttcgacggcgacggctactacctcaagtcggccgccgaa
atgcgcgagatctgggatgacgaagtgcccggcgcgtgcgacgccacgttgctgatcgcc
gagcgggtgcagtcgtacgccgaggtgtggacaccgcgcaaccggatgccggtttttccc
gtgcccgcggggcacgaccaggggtcctggctgcgccgtgaggtggacgccgggctggcc
cggcgattccccgacggtccgccgcagaactacctcgcgcgggcggcctacgagatcgac
gtcatctgtgcgaagggttttccgtcgtacttcctgatcgtggccgacctgatcaaccat
gcgcgctcggtgggcatccgggtcggccccggtcgtggctcggcggcgggctcattggtc
gcctacgccctcggcatcaccgatatcgacccgatcccacacggcctgctgttcgagcgg
ttcctcaaccccgagcgcacgtcgatgcccgacatcgacatcgacttcgacgaccgccgc
cgcggtgaaatggtgcgctatgccgctgacaagtggggccacgaccgggtcgcccaggtc
atcaccttcggcaccatcaaaaccaaagcggcgctgaaagattcggcgcgcatccactac
gggcagcccgggttcgcgatcgccgaccggatcaccaaggcgctgccgccggcgatcatg
gccaaagacattccgctgtcgggcatcaccgatccggcccacgagcgctacaaggaagcc
gctgaggtgcgtggtctgatcgaaaccgacccggacgtacgcaccatctaccagacggca
cgcggcctggaaggcctgatccgcaacgccggcgtgcacgcctgtgcggtgatcatgagc
agcgaaccgctgaccgaggccatcccgctgtggaagcgtccgcaggacggggcgatcatt
accggttgggactacccggcgtgcgaggccatcggcctgctgaagatggactttttgggg
ctgcgcaacctgaccatcatcggcgacgcgatcgacaacatcaaggccaacaggggaatc
gacctcgatctggaatcggtgccgctggacgacaagcccacctacgatctgctgggccgc
ggcgacaccctgggcgtgttccagctcgacggtggcccgatgcgcgacctgctgcgtcgc
atgcaacccaccggtttccaggatgtcgtcgccgtcatcgcgctgtaccggcccggcccg
atgggccaaaatgcccacaacgactacgcggatcgcaagaacggccgtcaggagatccgg
cccatccaccccgagctggccgaaccgctggaggagatcctggccgaaacctacggtctg
atcgtctatcaagagcagatcatgcgcattgcgcagaaggtggccggctactcgctggcc
cgcgccgacatcctgcgcaaggcgatgggcaagaagaagcgcgaggtgctcgacaaggag
tacgaagggttcgcggacggaatgaaggccaacggattttccgccggcgccatcaaggcg
ctgtgggacaccgtcctgccgttcgccgactacgcgttcaacaagtcacacgccgccggc
tacggcatggtgtcctactggaccgcctacctcaaggccaactaccccgccgagtacatg
gccggcctgttgacctccgtcggcgacgacaaggacaaggcggccgtttacctggccgac
tgccgcaagctgggcatcaccgtgctgccacccgacgtcaacgagtccggcctgaacttc
gcgtcggtgggcaccgacatccgctatggcctgggcgctgtgcgcaacgtcggcgccaac
gtggtggcgtcgttgatcaacacccgcagcgacaaaggcaagttcaccgacttctcggac
tacctgaacaagatcgacatctcggcgtgcaacaagaaggtcaccgagtcgttgatcaag
gcgggcgcgttcgattcgctcgggcatgcgcgcaagggtctgttcctggtccactccgac
gccgtggactcggtgctgggcaccaagaaggccgaggcgatgggccagttcgacctgttc
ggcggtaccgatgccggcaccgacgcggtattcaccatcaaggtccccgacgacgaatgg
gaggacaagcacaaacttgccctggaacgggagatgctgggactgtacgtgtccgggcat
ccgctcaacagggtggcacacctgttgtccacccaggtcgacaccgccatcccggcggtc
ctcgacggtgatgtccccaacgacgcccaagtgcgggtgggcggcatcctggcctcggtg
aaccggcgggtcaacaagaacggaatgccttgggcatcagcacaattggaggatctgacc
ggcagcatcgaggtgatgttcttcccgcacacctattccagctacggcgccgacatcgcc
gacgacgcggtggtgctgatcaacgccaaggtggcgatccgcgacgaccgtatcgcgttg
atcgccaacgaccttgtggtgccggacttttccaacgctgcggcggatcggccgctggcc
gttagcctgcccacccgccagtgcaccttcgacaaggtgagcgcgctcaagcaggtgctg
gcacgccatcccggcacctcccaggtgcatctgcggctcatcagcggagaccggatcacc
acgctgcagctggatcagtcgctgcgggtgacgccgtcgccggcgctgatgggggatctg
aaggagctgttgggtccggggtgtctgggcggctag
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integrated database retrieval system
