Mycobacterium shinjukuense: MSHI_18440
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Entry
MSHI_18440 CDS
T07415
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
mshj
Mycobacterium shinjukuense
Pathway
mshj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mshj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSHI_18440 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mshj03021
]
MSHI_18440 (rpoZ)
03400 DNA repair and recombination proteins [BR:
mshj03400
]
MSHI_18440 (rpoZ)
Enzymes [BR:
mshj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSHI_18440 (rpoZ)
Transcription machinery [BR:
mshj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MSHI_18440 (rpoZ)
DNA repair and recombination proteins [BR:
mshj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MSHI_18440 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BBX73938
UniProt:
A0A7I7MNY0
LinkDB
All DBs
Position
complement(2064670..2064996)
Genome browser
AA seq
108 aa
AA seq
DB search
MSQSNASLAAVPPADQFDPSSGGVGAYDTPLGITNPPIDELLDRVSSKYALVIYAAKRAR
QINDYYNQLGEGILEYVGPLVEPGLQEKPLSIALREIHADLLEHTEGE
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtccaatgcgtcgttggccgccgttcccccggcggatcagttcgatccgtcg
tcggggggagtgggcgcctatgacaccccgttgggcatcaccaatccgcccatcgacgag
ttgctggaccgcgtctcgagcaagtacgccctggtgatttacgcggcgaagcgggcgcgg
cagatcaacgactactacaaccagctcggcgagggcatcctggaatacgtcggcccgctg
gtcgagcccggcttgcaggaaaagccgctgtccatcgcgttgcgcgagatccacgccgac
ctgctcgagcacaccgagggcgagtag
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integrated database retrieval system
