Mycobacterium shinjukuense: MSHI_24270
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Entry
MSHI_24270 CDS
T07415
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mshj
Mycobacterium shinjukuense
Pathway
mshj03420
Nucleotide excision repair
mshj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mshj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSHI_24270
03430 Mismatch repair
MSHI_24270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mshj03400
]
MSHI_24270
Enzymes [BR:
mshj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSHI_24270
DNA repair and recombination proteins [BR:
mshj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSHI_24270
MMR (mismatch excision repair)
Other MMR factors
MSHI_24270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBX74521
UniProt:
A0A7I7MQM3
LinkDB
All DBs
Position
complement(2651312..2654638)
Genome browser
AA seq
1108 aa
AA seq
DB search
MTARYSPAELACALGLFPPTEEQAAVIGAPPGPLVVIAGAGAGKTETMAARVVWLIANGY
AEPGQVLGLTFTRKAAGQLLRRVGSRLARLAGIGSPAGGRYPHGLAGRDAAGSPVVSTYH
AFAGSLLREYGPLLAVEPDTRLLGETELWQLAFDVVTGYGGELRTDKTPAAVTSMVLRLW
GQLAEHLVDTGQLRDTHLELERLVHTLPAGRYQRDRGPSQWLLRMLATQTERAQLVPLLD
ALRERMRAGKVMDFGLQMASAARLAATFPHVGQDLRSRYRVVLLDEYQDTGHAQRVALSA
LFGGGVDDRLALTAVGDPIQSIYGWRGASATNLPRFTTDFPRSDGTPAQVLELRTSWRNP
PRALRVANAISAEARRRSVVVRALRPRPDAPPGTVRCALLADVHAERGWIADHLQERYRR
ARADGVSPPTAAVLVRRNSDAAPFAEALRARGIPVEVIGLAGLLSIPEVADLVAMLRLVA
DPTAGAATMRVLTGPRWRLGGKDLAALWRRALELVAGAPPTASPTPESVATAAGADADSP
CLAEAICDPGPADRYSVVGYQRIGALAGELSVLRGHLGRALPDLVAEVRRVLGLDCEVRA
AVAASGAGAGAEHLDAFADVVAGYAERASTTSGEASVAGLLAYLDAAAVVENGLPPAQPV
VARDRVQVLTVHAAKGLEWQVVAVAHLSGGTFPSSVSKSCWLTDPAELPPLLRGDRAAVG
TFGVPVLDTSAVGDRKQLSDKIAEHRRQLDQRRVDEERRLLYVAVTRAEDTLLLSGHHWD
ANRIKPRGPSDFLCELKDVIDRSARAGDPCGVVEHWAPPPAEGERNPLRDTVIEELWPAD
PLAACRGAVERGAALVAEAMSTELPENDQWAADVLGPPPAGGAPAAADVDALLAERARAR
QAPARRLPSQLSVSGLVELARDPAGAAHRLMYRLPTRPDPHALLGNAFHCWVQRFYGAEL
LFDVGDLPGAADSDLGDTEELARLQEAFTRSPWAARTPIAIEVPFEMPIGDTVVRGRIDA
VFADADGGATVVDWKTGARPHRSEEMRQAAVQLAVYRLAWAALRGCPEAAVRTAFYYVRS
GITVVPDTLAGPSELAALLADSGRPVEV
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccggtacagtcccgccgaattggcgtgtgcgctaggacttttcccgcccacc
gaggagcaggccgcggtcattggcgcgcctccgggcccgctggtggtcatcgcgggagcc
ggagccggcaaaacggagacgatggccgcgcgggtggtgtggctgatcgccaacggctac
gccgaacccggccaggtgctgggtttgacgttcacccgcaaggccgccggccagctgctg
cggcgcgttgggtcccggctggcccgactggccggcatcggctcccccgcaggcgggcgg
tacccccacggccttgccggccgcgacgccgcgggctccccggtggtcagcacctatcat
gccttcgccggctcgttgctgcgtgagtacggcccgctgctcgccgtggaaccggacacc
cggttgctcggcgagaccgagctgtggcagctggcgttcgatgtggtcaccggatacggc
ggcgagctgcgcaccgacaagaccccggcggcggtcacctcgatggtgctgcggttgtgg
ggtcagctcgccgagcacctggtggacaccggccaactccgcgacacccacctcgagttg
gaaaggctggtgcacaccctgccggcgggccgctaccagcgtgaccggggccccagccag
tggctgctgcggatgctggccacccagaccgagcgcgcccagctggtgccgttgctggac
gcgttgcgggaacgcatgcgcgccgggaaggtgatggacttcggcttgcagatggcgtcg
gccgcacggttggcggcaaccttcccgcatgtcggtcaggacctgcggagccgctaccgg
gtggtgctgctcgacgaataccaggacaccggacacgcccaacgggtggcgttgtcggcg
ctgttcggcggcggcgtcgacgaccggctggcgctgacggccgtcggcgacccgatccag
tcgatctacggctggcggggcgcctcggcgaccaacctgccgcggttcaccaccgacttt
ccgcgctccgacgggacccccgcgcaggtgctcgagctgcggaccagctggcgcaacccg
ccgcgagcgctgcgcgtggccaacgccatctcggcggaggcgcgccggcgctcggtcgtg
gtgcgcgcgctgcggccgcgcccggacgccccgcccgggaccgtccggtgcgcgctgctg
gccgatgtgcacgccgaacgggggtggatcgccgatcacctgcaggagcgctaccgccgc
gcccgggccgacggcgtcagcccacccaccgccgcggtgctggtgcgccgcaactccgac
gccgcacccttcgccgaagcccttcgcgctcgcggcatcccggtcgaagtcatcggattg
gccgggctgctgtccatccccgaggtggccgacctggtggccatgctgcggctggtcgcc
gacccgacggccggcgcggccacgatgcgggtgctgaccggtccgcggtggcggctcggc
ggcaaggacctggccgcgctgtggcggcgcgccctggagttggtggcgggagcaccgccc
accgcgtcgcccacccccgagtcggtcgccacggcggccggcgcagacgccgacagcccg
tgtctggcggaagccatctgcgacccgggcccggccgaccggtactcggtggtgggatac
caacggatcggcgcgctggccggcgaactgagcgtcttgcgtggccacctcggtcgcgca
ctgccagacctggtcgccgaggtgcgccgcgtgctgggcctcgactgcgaggtccgcgcc
gcggtggcggcgtcgggggcgggggccggcgccgagcatctcgacgcgtttgccgacgtc
gtcgccggttacgccgagcgggcgagcaccacgtccggcgaggcctcggtcgccggtctg
ctggcctacttggacgcggccgcggtggtggaaaacgggttgccgccggcccagccggtg
gtggcgcgcgaccgcgtccaggtgctgaccgtgcacgcggccaaggggttggagtggcag
gtggtggcggtggcacacctgtcgggggggacgttcccttcgagcgtgtcgaagagctgc
tggctcaccgaccccgccgaactgccgccgctgctgcgcggcgaccgcgccgcggtgggc
accttcggtgtcccggtactggacacctcggccgtcggcgatcgaaagcagttgtcggac
aagatcgccgaacatcgtcgccagctcgatcagcgccgcgtcgacgaggagcgccgactg
ttgtatgtcgcggtcacccgcgccgaggacaccctgctgctgtctggtcatcactgggat
gccaacaggatcaagccgcgcgggccgtcggatttcctgtgcgagctcaaggatgtcatc
gaccgttccgctcgggccggcgatccctgcggggtggtggaacactgggcgccgccgccg
gcggaaggtgagcgaaacccgttgcgcgacacggttattgaggagctttggcccgctgac
ccgttggccgcgtgccgcggcgccgtcgaacggggggcggcgctggtggccgaggcgatg
tcgacggagttgcccgagaacgaccagtgggccgccgatgtcctcggtcccccgccagcg
ggtggtgctcccgcggccgccgacgtcgacgcgctgttggccgagcgcgcgcgcgcgagg
caagcacccgcgcgtcggttgccaagccagttatcggtcagcggtctggtggagctggcc
cgcgaccccgccggcgcggcgcatcggctgatgtatcgcctacccacgcgtccggacccg
catgcgttgctgggcaacgcatttcactgctgggttcagcggttctacggtgccgagttg
ttgttcgatgtgggcgaccttccgggtgcggcggactccgacctgggtgacaccgaggag
ttggccaggttgcaggaggcgttcacccggtccccatgggcggcccgcaccccgatcgcc
atcgaggtgcccttcgaaatgccgatcggcgacaccgtggtgcgcggccgcatcgacgcg
gtattcgccgacgccgacggcggcgccaccgtggtggactggaagaccggtgcgcggccg
catcggtcggaggagatgcgacaggccgctgttcagcttgccgtctatcggttggcctgg
gccgcgttgcgcggatgcccggaagccgcggtgcgtaccgccttctactacgtccgcagc
gggatcaccgtcgtccccgacacgctggccggcccgagcgagctggccgcactgctggcc
gactccggccgaccggtcgaggtctga
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integrated database retrieval system
