Mycobacterium shinjukuense: MSHI_25320
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Entry
MSHI_25320 CDS
T07415
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mshj
Mycobacterium shinjukuense
Brite
KEGG Orthology (KO) [BR:
mshj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mshj03021
]
MSHI_25320 (sigF)
Transcription machinery [BR:
mshj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MSHI_25320 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
PF0610-like_N
HTH_3
HTH_24
HTH_IclR
MarR_2
MarR
HTH_20
DUF7343
HTH_ParB
KORA
Sigma70_ECF
Peptidase_inhib_put
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BBX74626
UniProt:
A0A7I7MR91
LinkDB
All DBs
Position
complement(2755724..2756458)
Genome browser
AA seq
244 aa
AA seq
DB search
MPAMFRELAGFAAGSAEFVRHRDKIVKRCLPLADHIARRFEGRGEPRDDLIQVARVGLVN
AVLRFDVETGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGAASAELSQRL
GRAPTATELAAELGMDRAEVVEGLVAGTSYNTLSIDSGSGNEDGEVRVIADTLGEVDAGL
ERIENREALRPALEALPERERMVLVLRFFESMTQTQIAERVGISQMHVSRLLAKSLAQLR
DQLL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccatgttccgtgagctggccggtttcgccgccggctcagccgaattcgtgcgc
caccgcgacaagatcgttaagcggtgcctgccgttggccgatcacatcgccaggcggttc
gagggccgtggcgaaccgcgtgacgacctgattcaggtcgcccgggttggattggtcaac
gccgtgctccgcttcgacgtcgagaccggctcggatttcgtctcgttcgcggtgcccacg
atcatgggagaggtccggcggcacttccgcgacaacagctggtcggtcaaggtcccgcgg
cgcctgaaggaactacacctacggctgggcgccgccagcgccgagttgtcgcaacggctg
ggtcgtgcgcccaccgcgaccgagctcgccgccgaactcggtatggaccgcgccgaggtg
gtagaaggcctggtggcggggacctcttacaacaccttgtccatcgacagtggtagcggc
aacgaagacggcgaggttcgtgtcatcgcggacacgctgggcgaggtcgacgctggcctg
gagcggatcgagaatcgcgaggcgcttcgtccggcgctcgaggcgctgcccgaacgagaa
cgaatggtgttggtgctcaggtttttcgagtcgatgacacaaacacagatcgccgagcgg
gtcggcatctcacagatgcacgtgtcgcggctgctggcgaaatcgctggcacagctgcgc
gaccagttgttatga
DBGET
integrated database retrieval system
