Mycobacterium shinjukuense: MSHI_26820
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Entry
MSHI_26820 CDS
T07415
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mshj
Mycobacterium shinjukuense
Pathway
mshj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mshj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSHI_26820 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mshj03021
]
MSHI_26820 (rpoA)
03400 DNA repair and recombination proteins [BR:
mshj03400
]
MSHI_26820 (rpoA)
Enzymes [BR:
mshj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSHI_26820 (rpoA)
Transcription machinery [BR:
mshj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MSHI_26820 (rpoA)
DNA repair and recombination proteins [BR:
mshj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MSHI_26820 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BBX74776
UniProt:
A0A7I7MRT9
LinkDB
All DBs
Position
complement(2948826..2949869)
Genome browser
AA seq
347 aa
AA seq
DB search
MLISQRPTLSEDILTDNRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PSMHIATLNDKGKLEIELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKSSITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVSRTESDLLDIRNFGQKSIDEVKVK
LHQLGLSLKDSPPSFDPSEVAGYDVATGGWATDTGYEEQDYAETEQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttcacagcgccccacattgtccgaggacatcctcaccgacaacaggtcccag
ttcgtcatcgagccgctggagccgggattcggttacacgctgggcaattcgctgcgtcgc
acactgctgtcgtcgattcccggcgcggcggtcaccagcatccgcatcgacggcgtgctg
cacgagttcaccaccgtgcccggggtgaaagaggatgtcaccgacatcatcttgaacctc
aaaggcctggtggtgtcctcggaggaggacgagccggtcacgatgtatctgcgcaagcag
ggtccgggcgaggtcaccgcgggtgacattgtgccgcctgccggtgtcaccgtgcacaac
ccgtccatgcacatcgccacgctgaacgacaagggcaagctggaaatcgagctcgtcgtc
gagcgcgggcgcggctatgttccggccgtgcagaacagggcttcgggcgccgaaatcggc
cgtatcccagtcgattccatctactcgccggtgctcaaggtgacctataaggtggaagcc
acccgtgtcgagcagcgcaccgacttcgacaagctgattctggacgtggagaccaagagt
tcgatcacgccgcgcgacgcgttggcatcggcgggtaagacgctggtcgaattgttcggg
ctggcacgcgaactcaacgtcgaggccgagggcatcgagatcgggccgtcgccggctgag
gccgaccacatcgcgtcgtttgcgctgccgatcgacgacctggacctgaccgtgcggtcc
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagctggtctcacgtaccgaa
tctgacctgctcgacatccgcaacttcggccagaagtccatcgatgaggtgaaggtcaag
ctgcaccagctgggactgtcgctcaaggacagcccgcccagcttcgacccctcggaagtc
gcgggttacgacgtcgccaccggcggctgggccaccgacacgggctacgaagagcaggac
tacgccgagaccgagcagctgtag
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