KEGG   Mycobacterium shinjukuense: MSHI_29750
Entry
MSHI_29750        CDS       T07415                                 
Symbol
lpdC
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mshj  Mycobacterium shinjukuense
Pathway
mshj00010  Glycolysis / Gluconeogenesis
mshj00020  Citrate cycle (TCA cycle)
mshj00260  Glycine, serine and threonine metabolism
mshj00280  Valine, leucine and isoleucine degradation
mshj00310  Lysine degradation
mshj00380  Tryptophan metabolism
mshj00620  Pyruvate metabolism
mshj00630  Glyoxylate and dicarboxylate metabolism
mshj00640  Propanoate metabolism
mshj00670  One carbon pool by folate
mshj00785  Lipoic acid metabolism
mshj01100  Metabolic pathways
mshj01110  Biosynthesis of secondary metabolites
mshj01120  Microbial metabolism in diverse environments
mshj01200  Carbon metabolism
mshj01210  2-Oxocarboxylic acid metabolism
mshj01240  Biosynthesis of cofactors
Module
mshj_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mshj_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mshj_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mshj_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mshj00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MSHI_29750 (lpdC)
   00020 Citrate cycle (TCA cycle)
    MSHI_29750 (lpdC)
   00620 Pyruvate metabolism
    MSHI_29750 (lpdC)
   00630 Glyoxylate and dicarboxylate metabolism
    MSHI_29750 (lpdC)
   00640 Propanoate metabolism
    MSHI_29750 (lpdC)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MSHI_29750 (lpdC)
   00280 Valine, leucine and isoleucine degradation
    MSHI_29750 (lpdC)
   00310 Lysine degradation
    MSHI_29750 (lpdC)
   00380 Tryptophan metabolism
    MSHI_29750 (lpdC)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MSHI_29750 (lpdC)
   00670 One carbon pool by folate
    MSHI_29750 (lpdC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mshj04147]
    MSHI_29750 (lpdC)
Enzymes [BR:mshj01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MSHI_29750 (lpdC)
Exosome [BR:mshj04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MSHI_29750 (lpdC)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_3 GIDA HI0933_like FAD_binding_2 DAO Thi4 NAD_binding_8 3HCDH_N ApbA LpxI_N
Other DBs
NCBI-ProteinID: BBX75069
UniProt: A0A7I7MV43
LinkDB
Position
complement(3247380..3248774)
AA seq 464 aa
MTHYDVVVLGAGPGGYVAAIRAAQLGLNTAIVEPKYWGGVCLNVGCIPSKALLRNAELVH
IFTKEAKTFGASGELTFDYGVAYDRSRKVAEGRVAGVHFLMKKNQITEIHGYGRFTDANT
LAVDLNDGGTQTVTFDNAIIATGSSTRLVPGTSLSANVVTYEEQILSRELPTSIIIAGAG
AIGMEFGYVLKNYGVEVTIVEFLPRALPNEDADVSKEIERQFKKLGVKILTATKVESIAD
NGSQVTVTVSKDGTAQELTAQKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDHMRTN
VGHIYAIGDVTGLAMLAHVAEAMGVVAAETIAGAETLALGDYRMLPRATFCQPQVASFGL
TEQQARDEGFDVVVARFPFTANAKAHGLGDPSGFVKLVADAKHGELLGGHLIGHDVSELL
PELTLAQKWDLTAGELARNVHTHPTMSEALQECFHGLVGHMINL
NT seq 1395 nt   +upstreamnt  +downstreamnt
gtgactcactatgacgtcgtcgtcctcggagccggtcctggtggatacgtcgcggccatc
cgggccgcgcaactcggcctgaataccgcaatcgtggaaccgaaatactggggcggagtc
tgcctcaacgtcggttgcatcccgtcaaaggcgttgctgcgcaacgccgaactggtgcac
atcttcaccaaggaggcgaagacctttggcgccagcggcgagctgaccttcgactacggg
gtcgcctacgaccgcagccgcaaggtggccgaaggtcgggtggccggcgtgcacttcctg
atgaagaagaaccagatcaccgagatccacggctacggtcggttcaccgacgccaacacg
ctagcggtcgacctcaacgacggcggcacccaaacggtcaccttcgacaacgccatcatc
gccaccggtagcagcacccgactggttccgggcacgtcgttgtcggccaacgtggtgacc
tacgaggaacagatcctgtcccgggagctgccgacgtcgatcatcatcgccggcgccggg
gccatcggcatggagttcggctacgtgctgaaaaactacggcgtcgaggtgaccatcgtg
gaattcctgccgcgcgcgctgcccaacgaggacgccgacgtgtccaaggagatcgagcgg
cagttcaagaagctgggcgtcaagatcctcaccgcgaccaaggtcgagtccatcgccgac
aacgggtcacaggtcaccgtgaccgtcagcaaggacggcacggcgcaagagctcacggcg
cagaaggtgttgcaggccatcgggtttgcccccaacgtcgagggctacggcttggacaaa
gccggtgtcgcgctcaccgaccgcaaggccatcggcgtcgacgaccatatgcgcaccaac
gtcgggcacatctacgccatcggcgacgtcaccgggttggcgatgctggcgcacgtcgcc
gaggccatgggcgtggtggccgccgaaaccatcgccggcgcagagactttggcgctgggc
gactaccggatgctgccgcgtgcgacgttctgccagccgcaggtggccagcttcgggctc
accgagcagcaggcccgcgacgagggtttcgacgtggtggtggccaggttcccgttcacc
gccaacgccaaggcgcacggcctgggcgaccccagtggtttcgtgaagctggtggccgac
gccaagcacggcgagctgctgggcggacacctgatcggccacgacgtgtccgagttgctg
ccggagctgacgctggcgcagaagtgggacctgacggccggcgaactggcccgcaacgtg
cacacccacccgacgatgtcggaggcgctgcaggagtgcttccacggcctggtcggtcac
atgatcaacctgtga

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