Mycobacterium shinjukuense: MSHI_34110
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Entry
MSHI_34110 CDS
T07415
Symbol
pks13
Name
(GenBank) polyketide synthase
KO
K12437
polyketide synthase 13
Organism
mshj
Mycobacterium shinjukuense
Brite
KEGG Orthology (KO) [BR:
mshj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mshj01004
]
MSHI_34110 (pks13)
Lipid biosynthesis proteins [BR:
mshj01004
]
Polyketide synthase
Modular PKS
MSHI_34110 (pks13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
Thiolase_N
Motif
Other DBs
NCBI-ProteinID:
BBX75505
UniProt:
A0A7I7MTK7
LinkDB
All DBs
Position
complement(3733393..3738657)
Genome browser
AA seq
1754 aa
AA seq
DB search
MAELDELHANDAPVRHPAKTDMTVPEMREWLRTWVGKAVGKSPDSIDESVPMVELGLSSR
DAVAMAADIEDLTGVTLSVAVAFQHPTIESLATRIIEGEPETSTSADDDVDWSRTGPAER
VDIAVVGLSTRFPGDMNSPKETWQALLDGRDGITDLPAGRWSEFLEEPRLAERVRNARTR
GGYLKDIKGFDSEFFAVAKTEADNIDPQQRMALELTWEALEHARIPASSLRGQAVGVFVG
SSTNDYSFLAVSDPTVAHPYAITGTASSIIANRVSYFYDFRGPSVTVDTACSSSLVAIHQ
GVQALRNGEADVVVAGGVNALITPMVTLGFDEIGAVLAPDGRIKSFSSDADGYTRSEGGG
MVVLKRVDDARRDGDQILAVIAGSAVNHDGRSNGLIAPNQDAQAEVLRRAYKDAGIDPRT
VDYIEAHGTGTILGDPIEAEALGRVVGRGRPADRPALLGAVKTNVGHLESAAGVASMAKV
VLALQHDKLPPSINFAGPSPYIDFDAMRLKMITEPTDWPRYGGYALAGVSSFGFGGANAH
VVVREVLPRDVIEREPEPVPEPAAHTPAAPAEAPTFEGHALRFDEYGQIITDARVAEDAE
PELPGLTEEALRLKDIALEELAAQEVTPPLIPLAVSAFLTSRKKAAAAELADWMESPEGR
ASSLESIGRSLSRRNHGRSRAVVLARDHEEAITGLRAIAEGKQRPNVFSVDGPVTNGPVW
VLAGFGAQHRKMGKGLYLRNEVFAQWIDKVDALVQDELGYSVLELILDDSRDYGIETTQV
TIFAIQIALGELLKHHGAKPAAVVGQSLGEAASAYFAGGLSLRDATRAICSRSHLMGEGE
AMLFGEYIRLMALVEYSADEIKTVFSDFPDLEVCVYAAPTQTVIGGPPEQVDAIIARAES
EGKFARKFQTKGASHTSQMDPLLGELTAELQGITPMSLTCGIFSTVHEGRYIKPGSEPIH
DVEYWKKGLRHSVYFTHGIRNAVDSGHTTFLELAPNPVALMQVGLTTAAAGLHDAQLIPT
LARKQDEVESMVSAMAQLYVYGHDLDIWTLFPRATGPLDYADIPPTRFKRKEHWLPAHFS
GDASVVMPGNHVALPDGRHVWEYAPRDGATDLAALVTAAATQVLPDAELTAAEQRAVPGE
GARLVTTMTRHPGGASVQVHARIDESFTLVYDALVARAGQESVLPTALGAGMTIAATATP
AAAEPAAEEPEAETLTDSLTNRYMPSDMTRWSPDSGETIAERLGLIVGSAMGYEPEDLPW
EVPLIELGLDSLMAVRIKNRVEYDFDLPPIQLTAVRDANLYNVEKLIEYAVEHRDEVQQL
HEYQKTQTAEEIARAQAELLSGAAPSMPPASDVSIPPPPTDPAGPSGSGHPNLAAAADAL
NQQAVAEALNSDVPPRDAAERVTFATWAIVTGKSAGGIFNPLPKLDEATAAKMAQRLAER
AEGPITAEDVLSSETIEALADKVRGYLEAGVVDGFVRTLRARPEGDSRVPVFVFHPAGGS
TVVYEPLLKRLPADTPMYGFERVEGSIEERAQQYVPKLIEMQGDGPYILVGWSLGGVLAY
ACAIGLKRLGKDVAFVGLIDAVRAGEEIPQTKEEIRRRWDRYARFAEKTFNVTIPAIPYE
QLEELDDEGQVRFVLDAVRQSGVQIPAGIIEHQRTSYLDNRAIDTAQIQPYDGRVTLYMA
DRYHDDAIMFEPRYAVRQPDGGWGEYVSDLEVVPIGGEHIQAIDEPIIAKVGEHMSRALD
DIEAVRGRSEVSKQ
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctggacgaactccacgcgaacgacgcacccgtgcggcaccccgcaaagacc
gatatgaccgttcccgagatgcgggagtggctgcgcacctgggtgggcaaggccgtcggg
aaatcaccggactcgatcgacgagtcggtgcccatggtcgagctggggttgtcgtcgcgg
gatgcggtggcgatggccgccgacatcgaagacttgaccggggtgacgctgtcggtcgcg
gtggcgttccagcatccgaccatcgaatcgctggcgacgcggatcatcgagggcgagccg
gagacaagcacatctgccgacgacgatgtggattggtcgcgcaccgggccggccgagcgg
gtcgacatcgcggtggtgggtttgtccacccgtttccccggcgacatgaacagcccgaag
gagacctggcaggcgctgctggacggccgtgacggtatcaccgacctgcccgcgggccgc
tggtcagagttcctggaagagccgcggctggccgagcgggtgcgcaacgcccgcacccgg
ggcggctacctgaaggacatcaagggcttcgactccgagttcttcgcggtggccaagacc
gaggccgacaacatcgacccgcagcagcggatggcgctggagctgacctgggaggcgctc
gagcacgcccgcatcccggcgtcgagcctgcgcggccaggccgtcggcgtgttcgtcggc
agctccaccaacgactacagcttcctggcggtctccgacccgacggtcgcgcacccctac
gccatcaccggcaccgccagctcgatcatcgccaaccgggtgtcgtacttctacgacttc
cgcggcccgtcggtcaccgtcgacacggcgtgctcgagttcgctggtggcgatccaccag
ggcgtgcaggcactgcgcaacggcgaggccgacgtggtggtcgccggcggggtgaacgcg
ctgatcacgccgatggtgacgctgggtttcgacgagatcggcgcggtgttggcgcccgat
gggcggatcaagtcgttctcctcggacgccgacggctacacccgctccgagggcggcggc
atggtggtgctcaagcgggtggacgacgcccgccgcgacggcgaccagatcctggccgtg
atcgccggcagcgcggtcaaccacgacggccggtccaacggcctgatcgcccccaaccag
gacgcgcaggccgaggtgctgcggcgggcctacaaggacgccggcatcgatccgcgcacc
gtcgactacatcgaggcgcacggcaccggcaccatcctgggtgacccgatcgaggccgag
gcgctgggccgggtggtcggccgggggcgtccggccgatcggccggcccttttgggggcg
gtcaagaccaacgtcggtcacctggagtcggcggccggggtggccagcatggccaaggtg
gtgctggccttgcagcacgacaagttgccgccgtcgatcaacttcgccggccccagcccc
tacatcgacttcgacgcgatgcgcctgaagatgatcaccgaacccaccgactggccgcgc
tacggcggttacgcgctggccggggtgtccagcttcggcttcggcggtgccaacgcgcac
gtggtggtgcgtgaggtgctgccgcgcgacgtgatcgaacgggaacccgaacccgtgccc
gagccggccgcccacaccccggcggcgccggccgaggcgcccacgttcgaaggccacgcg
ctgcggttcgacgagtacggccagatcatcaccgacgcccgggtggccgaggacgccgag
cccgagctgcccggcctcaccgaagaggcgctgcggctcaaggacatcgcgctggaagag
cttgcggcgcaggaagtgacaccgccgctgattccgctggcggtgtcggcgtttttaacg
tcgcgcaagaaggccgcggccgccgagctggcggactggatggaaagcccggaaggccgg
gcgtcgtcgctggagtcgatcggccggtcgctgtcgcggcgcaaccacggccgctcccgc
gcggtggtgctggcccgcgaccacgaggaggccatcacgggcctgcgggcgatcgccgag
ggcaagcagcggccgaacgtgttcagcgtcgacgggccggtgaccaacggcccggtctgg
gtgctcgccgggttcggcgcgcagcaccgcaagatgggcaagggcctgtatctgcgcaac
gaggtgttcgcgcagtggatcgacaaggtcgacgcgctggtccaggacgagctgggctac
tcggtgctggagctgatcctggacgactcccgggactacggcatcgagaccacccaggtc
accatttttgcgatccagatcgctttgggtgagctgctcaaacatcacggcgccaagccg
gccgcggtggtcggccagtcgctgggggaagccgcgtcggcctacttcgccggcggcctg
tcgctgcgcgacgccacccgcgcgatctgctcccgctcgcacctgatgggtgagggcgag
gcgatgctgttcggcgagtacatccggctgatggcgctggtggagtactccgccgacgag
attaagacggtgttctccgactttcccgatctggaggtgtgcgtctacgccgcgcccacc
cagaccgtcatcggcggcccgcccgaacaggtggacgcgatcatcgcccgagcggagtcg
gagggcaagttcgcccgcaagttccaaaccaagggcgccagccacacctcgcagatggac
ccgctgctgggcgagctcaccgcggagctgcagggcatcacgccgatgagcctgacgtgc
gggatcttttcgacggtgcatgagggccgctacatcaagccgggcagcgagcccatccac
gacgtcgagtactggaagaaggggctgcggcattccgtctacttcacccacggcatccgc
aacgccgtcgacagcgggcacaccaccttcctggagctggcacccaacccggtggcgctg
atgcaggtgggtctgaccacggccgccgccggtctgcatgacgcccagctgatccccacg
ctggcccgtaagcaggacgaggtcgagtcgatggtctcggcgatggcgcagctgtacgtc
tacggccacgacctggacatctggacgctgttcccccgcgccaccggaccgcttgactac
gccgacatcccgccgaccaggttcaagcgcaaggaacactggctgcccgcgcacttctcc
ggcgacgcctcggtggtcatgccgggcaaccatgtcgcactgccggacggccgacatgtc
tgggaatacgcgccccgggacggcgcgacggatctggccgcgttggtcaccgcggccgcg
acgcaggtgctgccggacgcggagctgacggccgccgagcaacgggcggtgcccggcgag
ggcgcccggctggttaccaccatgacccggcacccgggcggcgcgtcggttcaggtgcac
gcccgcatcgacgaatccttcacgctggtgtacgacgcgctggtggcccgggcgggtcaa
gagtcggtgttgccgacggcgctcggtgccggcatgacgatcgctgccacggccacgccc
gccgcggccgaaccggccgccgaggagccggaagccgagaccctgaccgacagcctgacc
aaccggtacatgcccagtgacatgacccgatggtccccggactccggtgagaccatcgcc
gagcggctgggcctgatcgtcgggtcggccatgggttatgagcccgaggacctgccgtgg
gaggtgccgctgatcgagctcggcctggactcgctgatggcggtgcggatcaaaaaccgc
gtcgaatacgacttcgacctgccgccgatccagctgaccgcggtgcgtgacgccaacctc
tacaacgtcgagaagttgatcgagtacgcggtcgagcatcgcgacgaggttcagcagctg
cacgagtatcagaagacccagaccgccgaggagatcgcccgggcgcaggccgaattacta
agcggggcagcgccttccatgcccccggcgtcggacgtttcgattccaccgccgccgact
gatcctgctggcccgtcgggtagcggacatcccaacctggctgccgccgcggatgcgctc
aaccagcaggccgtcgccgaggcgctgaactccgacgtgccgccgcgtgatgccgccgag
cgggtcaccttcgcgacgtgggcgatcgtcaccggcaagtcggcgggtggcatcttcaac
ccgctgcccaagctggacgaggcgaccgcggccaagatggcgcaacggctcgccgaacgc
gccgaaggcccgatcaccgccgaggatgtgctgtcgtcggagaccatcgaggcgctggcc
gacaaggtgcgcggctacctcgaggcgggtgtggtggacgggttcgtccgcaccctgcgg
gcccggccagagggcgactcgagggttcccgtgttcgtgttccatccggccggcgggtcc
acggtggtctatgagccgctgctgaagcggttgccggcggacaccccgatgtacggcttc
gagcgggtcgaggggtcgatcgaagaacgcgcccagcagtacgtccccaagttgatcgag
atgcagggcgacgggccctacatcctggtcggctggtcgctgggtggcgtgctggcctac
gcgtgcgcgatcgggctcaaacggctgggcaaggacgtcgcgttcgtcgggctgatcgac
gcggtgcgcgccggcgaggagatcccgcagaccaaggaggagatccgccggcgctgggac
cgctacgcccggttcgccgagaagacgttcaacgtgaccatccccgcgatcccctacgag
cagctggaggagctcgacgacgagggccaggtccggttcgtgctcgacgccgtgcgccag
agcggcgtgcagatcccggccgggatcatcgaacaccagcgcacgtcgtatctggacaac
cgggcgatcgacaccgcccagatccagccgtacgacggccgcgtcaccctctacatggcc
gatcgctaccatgacgacgcgatcatgttcgagccgcggtacgccgtccgccagccggac
ggcggctggggcgagtacgtctccgacctcgaggtggtgccgatcggtggcgagcacatc
caggccatcgacgagccgatcatcgccaaggtgggcgaacacatgagccgcgcgctggat
gacatcgaggccgtgcgcggccggagtgaggtaagcaagcagtga
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