Mycobacterium shottsii: MSHO_16940
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Entry
MSHO_16940 CDS
T07303
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
msho
Mycobacterium shottsii
Pathway
msho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MSHO_16940 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msho03400
]
MSHO_16940 (xseA)
Enzymes [BR:
msho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MSHO_16940 (xseA)
DNA repair and recombination proteins [BR:
msho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MSHO_16940 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
BBX56349
UniProt:
A0A7I7LA61
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All DBs
Position
complement(1605574..1606821)
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AA seq
415 aa
AA seq
DB search
MSPATASNSAENPFPVRAVAIRVAGWIDRLGTVWVEGQLAQITIRPNSKTVFMVLRDPAA
DMSLTVTCPRDLVLSAPVKLTEGTQVVVCGKPSFYTGRGTFSLRLNEIRAVGVGELLARI
ERLRRLLDAEGLFDPRLKRPIPFLPNTVGLITGRASAAERDVTTVAATRWPAVRFTVRNT
AVQGPNAVVQIVEALRELDSDLEVDVIVVARGGGSVEDLLPFSDETLCRAIAACRTPVIS
AVGHEPDNPLCDLVADLRAATPTDAAKKAVPDTAAEQRLVADLRQRSAQALRNWVSREQR
ALTQLRSRPVLADPLKALITRSDEIQRARSALRRDVSRLISTETENIGHLGARLATLGPA
ATLARGYAVVQTVSAAGQPMEVLRSVDGAPAGTRLRVRVGDGAVTAVSEGRVDGA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccagccacagcatcgaattcggccgagaacccgttcccggtacgcgcggtggcc
atccgggtcgccggctggatcgacaggttgggaacggtctgggttgaggggcaactagcc
cagatcacgatacgacccaactccaagacggtgttcatggtgctgcgcgatcccgcggcg
gacatgtcgctgaccgtcacatgcccgcgcgacctggtactgagcgcaccggtgaaattg
accgaaggcacccaggtggtggtctgcggaaagccctcgttctacaccgggcgtggcaca
ttttcgctgcgactcaacgagattcgcgctgtcggggtgggtgagctgctagcccggatc
gaacggctgcgccggctgctggacgccgaaggactcttcgatccgcgcctcaagcggcca
attcctttcttgcccaacactgtcggcctgatcaccggcagagccagcgccgccgagcgt
gacgtgacgacggttgccgcgacgcgctggcccgcagtgcgattcaccgtccgcaacacc
gccgtgcaggggcccaatgccgtcgttcagatcgtcgaagcgctccgtgagctcgattca
gacctggaagtcgatgtgatcgtggtggcccggggtggcggcagcgtcgaggatctcctg
ccgttttccgacgagacactgtgccgcgcgatcgcggcgtgccgcacacccgtgatcagt
gcggtcggccacgaacccgataatccgctgtgcgacctggtcgccgatctgcgcgcggcc
accccgaccgacgcggccaagaaggccgtccccgacactgccgccgagcaacgcctggtc
gcggacctgcgccagcgcagtgcacaagcgctgcgcaattgggtttctcgggagcagcgg
gcgttgacccagttgcgcagccgccccgttcttgccgacccgctcaaggcgctgatcacc
cgctccgatgaaatccagcgggcccggtcagcgcttcggcgtgatgtcagccggctgatc
agcaccgaaaccgaaaacatcggccacctgggtgcgcggctggccaccttgggtccggcg
gccacactggcccgcggatacgcggtggtgcagacggtttcagccgccggtcaaccaatg
gaagtgctgcggtcggtcgatggcgcgcccgcgggcaccagactacgagtgcgggtaggc
gacggtgccgttaccgcggtaagcgagggacgtgttgatggagcttga
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