Mycobacterium shottsii: MSHO_19050
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Entry
MSHO_19050 CDS
T07303
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msho
Mycobacterium shottsii
Pathway
msho03030
DNA replication
msho03430
Mismatch repair
msho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSHO_19050
03430 Mismatch repair
MSHO_19050
03440 Homologous recombination
MSHO_19050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msho03032
]
MSHO_19050
03400 DNA repair and recombination proteins [BR:
msho03400
]
MSHO_19050
Enzymes [BR:
msho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSHO_19050
DNA replication proteins [BR:
msho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSHO_19050
DNA repair and recombination proteins [BR:
msho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSHO_19050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
TerB
DUF4031
BRCT
Rv2179c-like
RhodobacterPufX
DUF533
Tic110
Motif
Other DBs
NCBI-ProteinID:
BBX56560
UniProt:
A0A7I7LA93
LinkDB
All DBs
Position
complement(1818172..1819392)
Genome browser
AA seq
406 aa
AA seq
DB search
MAGFAVLDFETTGFAAEYDRVVEVGLVLLSAEGDIEDEWSTLINPHRDVGATERHGIRAR
DVLGAPAFEAIIPRLLRDLRGRVFVAHNVNFDQRFLLAELRRAGVPLDNPWLTGLCTMRW
AGRLLPAASRKLPDCCDAAGVVLTDAHRALADARATASLLKYLIDHCGSPPPWAKEIDGA
EDFEWPQVAGPEVRLVARAAWGAAPPRPPAGWLDRIVARMPHEDDPRVESYLEILESALL
DCYLSCHEEDALVEMADSLGLSRRLLDEIHHDYLRSMARVAVADGVVTDDERADLLQVAE
LLGLSADRVDASLAMASARSACTEFALAAGDVLCLTGSMRRPRSEWEAELAQRGIEVGSL
TRRARLLVAADPDSATGKARKARKYGIPIINEDALSRLLGARTSGE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtggccggttttgccgtcctggacttcgagaccaccggattcgccgccgagtacgaccgt
gtggtcgaggttggcctcgtgctgctgtcggcggagggggacatcgaggacgagtggtca
actctgatcaatcctcatcgcgatgttggtgctaccgagaggcatgggatccgggcgcgt
gacgtactcggcgcgcccgccttcgaggcgatcatcccgaggttgttgcgggacctccgt
gggcgggttttcgtggcccacaacgtcaactttgatcagcgatttttgctggcagagttg
cgtcgggccggagtgccgttggataacccgtggctgaccggattgtgcacgatgaggtgg
gccggtcgcctgcttccggctgcgtcgcggaagctgccggattgttgcgatgccgctggc
gtcgtcctcactgacgcccatcgcgcgctcgcggatgcccgggctacggcgagtctgctg
aagtacctcatcgaccattgcgggagcccgccgccgtgggctaaggagatagacggcgcc
gaggacttcgagtggccgcaggtggccggcccggaagtgcggttggtggcgcgcgcggcg
tggggggcagcgcctccacgtcccccggcagggtggcttgatcgcatcgtcgcgcgcatg
ccccacgaggacgaccctcgcgtcgagtcctacctcgaaatcctcgaatccgccctcctc
gactgttacctgtcctgccacgaggaggatgcgctggttgagatggccgacagcttgggc
ctctcgcgtcggctgctcgacgagatccaccacgactacctgcggtcgatggcgagggtt
gcggttgccgatggggttgtcaccgacgacgagcgcgctgacctgcttcaggtcgctgaa
ctcctcgggctgtccgccgaccgcgtggatgcctctctggcaatggcttctgcacgttcg
gcctgcaccgagttcgcgttggcggcgggcgacgttctatgcctcacggggtcgatgcgg
cgcccccggtctgagtgggaggcagaactagctcagcgcggcatcgaggtcgggtcgctt
acccgcagggcgcgcctgttggtcgctgccgatcccgactcggccactggaaaggcaagg
aaggcgcgcaagtacggcatccccatcattaacgaggatgcgctcagtcgtctgctagga
gctcgaacctctggcgaatga
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